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Solanum lycopersicum mRNA Solyc12g009300.1.1

mRNA details  
Name
Solyc12g009300.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g009300.1.1
Length
2,418
  
Description
Sucrose synthase (AHRD V1 **** O82693_SOLLC); contains Interpro domain(s) IPR012820 Sucrose synthase, plants and cyanobacteria IPR000368 Sucrose synthase
Location(s)
SL2.50ch12:2573935..2577879
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005985
  • GO:0016157
  • GO:0009058
Length
3945
Nb exon
13
Sifter term
GO:0016157
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g009300.1.1 Sucrose synthase (AHRD V1 **** O82693_SOLLC); contains Interpro domain(s) IPR012820 Sucrose synthase, plants and cyanobacteria IPR000368 Sucrose synthase

ATGGCTGAACGTGTTCTGACTCGTGTTCATAGACTTCGTGAACGTGTTGATGCAACTTTAGCTGCTCACCGCAATGAGATACTGCTGTTTCTTTCAAGGATTGAAAGCCACGGAAAAGGGATCTTGAAACCTCACGAGCTTTTGGCTGAGTTCGATGCAATTCGCCAAGATGACAAAGACAAACTGAATGAACATGCGTTCGAAGAACTCCTGAAATCCACTCAGGAAGCGATTGTTCTGCCCCCTTGGGTTGCACTTGCTATTCGTTTGAGGCCTGGTGTCTGGGAATACGTCCGTGTGAACGTCAATGCACTAGTTGTTGAGGAGCTGTCCGTCCCTGAGTATTTGCAATTCAAGGAAGAACTTGTCGACGGAGCCTCAAATGGAAATTTCGTTCTCGAGTTGGATTTCGAGCCTTTCACTGCATCCTTTCCTAAACCAACCCTCACCAAATCTATTGGAAATGGAGTTGAATTCCTCAATAGGCACCTCTCTGCCAAAATGTTCCATGACAAGGAAAGCATGGCCCCGCTTCTCGAATTTCTCCGCGCTCACCATTATAAGGGCAAGACAATGATGCTGAATGATAGGATACATAATTCGAATACTCTTCAAAATGTCCTAAGGAAGGCAGAGGAATACCTCATTATGCTTCCCCCGGAAACTCCATTTTTTGAATTCGAACACAAGTTCCAAGAAATCGGATTGGAGAAGGGATGGGGGGACACGGCGGAGCGTGTGCTAGAGATGGTGTGCATGCTTCTTGATCTCCTTGAGGCACCTGACTCATGTACTCTTGAGAAGTTCTTGGGGAGAATTCCGATGGTCTTCAATGTGGTTATCCTTTCCCCTCATGGATATTTTGCCCAAGAAAATGTCTTGGGTTATCCCGACACCGGTGGCCAGGTTGTCTACATATTAGATCAAGTTCCCGCCTTGGAGCGTGAAATGCTTAAGCGCATAAAGGAGCAAGGACTTGATATCATCCCCCGTATTCTTATTGTTACTCGGCTGCTGCCCGATGCAGTTGGAACCACTTGCGGTCAGAGGCTTGAGAAGGTGTATGGAACAGAACACTCACATATTCTTAGAGTCCCCTTTAGGACTGAGAAGGGTATCGTTCGCAAATGGATCTCTCGCTTTGAAGTGTGGCCATATATGGAGACTTTCATTGAGGATGTTGCAAAAGAAATATCTGCAGAATTGCAGGCCAAGCCAGATTTGATAATCGGAAACTACAGTGAGGGCAATCTTGCTGCTTCTTTGTTAGCTCACAAGTTAGGCGTAACGCAGTGCACCATCGCCCATGCCTTGGAGAAAACGAAATATCCTGATTCCGACATTTACTGGAAAAAGTTTGATGAAAAATACCATTTCTCGTCCCAGTTTACAGCTGATCTCATTGCAATGAATCACACTGATTTCATCATCACCAGCACATTCCAGGAGATAGCAGGAAGCAAGGACACTGTAGGACAATATGAGAGCCATATGGCATTTACAATGCCTGGATTGTACAGAGTTGTTCATGGCATTAATGTGTTCGACCCCAAGTTCAACATCGTCTCACCTGGAGCTGATATTAACCTCTACTTCCCGTACTCCGAATCGGAAAAGAGACTTACAGCATTTCACCCTGAAATTGATGAGCTGCTGTACAGTGACGTTGAGAATGACGAACATCTGTGTGTGCTCAAGGACAGGACTAAGCCAATTTTATTCACAATGGCAAGGTTGGATCGTGTGAAGAATTTAACCGGACTTGTTGAGTGGTACGCCAAGAATCCACGACTAAGGGGATTGGTTAACCTGGTCGTAGTTGGCGGAGATCGAAGGAAGGAATCCAAAGATTTGGAAGAGCAGGCAGAGATGAAGAAGATGTATGAGCTAATAGAGACTCATAACTTGAATGGCCAATTCAGATGGATTTCTTCCCAGATGAACCGAGTGAGGAATGGTGAGCTCTACCGATACATTGCTGACACTAAGGGAGCTTTTGTGCAGCCTGCATTCTACGAGGCTTTTGGTCTGACTGTTGTCGAAGCAATGACTTGTGGTCTGCCTACATTTGCAACTAATCACGGTGGTCCAGCTGAAATCATCGTTCATGGAAAATCCGGTTTCCATATTGATCCATATCACGGTGAGCAAGCTGCTGATCTGCTAGCTGATTTCTTTGAGAAATGCAAGAAAGAGCCTTCACATTGGGAAACCATTTCGACGGGTGGTCTGAAGCGCATCCAAGAGAAGTACACTTGGCAAATCTACTCCGAAAGACTACTGACGCTGGCTGCTGTTTATGGGTTCTGGAAACATGTTTCTAAGCTTGATCGTCTAGAAATCCGTCGCTACCTTGAAATGTTTTACGCTCTCAAGTACCGTAAGATGGCTGAAGCTGTTCCATTGGCTGCTGAGTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g009300.1.1SL2.50ch12:2573934..2577879806-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g009300.1SL2.50ch12:2573935..25778793,945-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g009300.1.1.1SL2.50ch12:2577782..257787998-n/a
exonexon:Solyc12g009300.1.1.10SL2.50ch12:2575091..2575315225-1
exonexon:Solyc12g009300.1.1.11SL2.50ch12:2574280..2574843564-1
exonexon:Solyc12g009300.1.1.12SL2.50ch12:2574057..2574195139-1
exonexon:Solyc12g009300.1.1.13SL2.50ch12:2573935..257396430-n/a
exonexon:Solyc12g009300.1.1.2SL2.50ch12:2577423..2577549127-1
exonexon:Solyc12g009300.1.1.3SL2.50ch12:2577176..2577327152-n/a
exonexon:Solyc12g009300.1.1.4SL2.50ch12:2576900..2577092193-1
exonexon:Solyc12g009300.1.1.5SL2.50ch12:2576292..2576627336-n/a
exonexon:Solyc12g009300.1.1.6SL2.50ch12:2576117..257621296-n/a
exonexon:Solyc12g009300.1.1.7SL2.50ch12:2575852..2576025174-n/a
exonexon:Solyc12g009300.1.1.8SL2.50ch12:2575655..2575771117-n/a
exonexon:Solyc12g009300.1.1.9SL2.50ch12:2575393..2575559167-n/a
intronintron:Solyc12g009300.1.1.10SL2.50ch12:2575316..2575392n/a-n/a
intronintron:Solyc12g009300.1.1.11SL2.50ch12:2574844..2575090n/a-n/a
intronintron:Solyc12g009300.1.1.12SL2.50ch12:2574196..2574279n/a-n/a
intronintron:Solyc12g009300.1.1.13SL2.50ch12:2573965..2574056n/a-n/a
intronintron:Solyc12g009300.1.1.2SL2.50ch12:2577550..2577781n/a-n/a
intronintron:Solyc12g009300.1.1.3SL2.50ch12:2577328..2577422n/a-n/a
intronintron:Solyc12g009300.1.1.4SL2.50ch12:2577093..2577175n/a-n/a
intronintron:Solyc12g009300.1.1.5SL2.50ch12:2576628..2576899n/a-n/a
intronintron:Solyc12g009300.1.1.6SL2.50ch12:2576213..2576291n/a-n/a
intronintron:Solyc12g009300.1.1.7SL2.50ch12:2576026..2576116n/a-n/a
intronintron:Solyc12g009300.1.1.8SL2.50ch12:2575772..2575851n/a-n/a
intronintron:Solyc12g009300.1.1.9SL2.50ch12:2575560..2575654n/a-n/a
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http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17994614%2Fdetails feature 17994614
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