Solanum lycopersicum mRNA Solyc12g010170.1.1

mRNA details  
Name
Solyc12g010170.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g010170.1.1
Length
1,164
  
Description
Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch12:3285767..3293079
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
7313
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g010170.1.1 Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGCAAGCTATGAACTCATTTCAAAGCACCGGCGAAAATGGTGCTTCGTCCGGCGAACACATGAGTCATTCCCATTTCGATCCGTCGTCGTCTCACGACGACTTCCTCCAACAGATTCTCTCTTCCGTTCCTTCTTCTTCTCCCTGGCCAGAAATCTCCGGCGACGGTCACCCCTACAATTTCGACGACCATCAGTCAACTCTTCTGGCTTCCAAACTCCGGCAGCATCAGATCAACGGCGGTACCTCTGCTGCTGCAGCTGCTAAAGCGTTGATGCTTCAGCAGCAGCTTTTGCTTTCCAGAGGAATCGCTGGTAATGGCGGCTCTGGGATAAACGGCGATCAAAACGACGACGGTTTGAATTCGGGGAATGATATTTCAGTTCAAGCTCTTTACAATGGATTCGCTGGATCTCTTGGTCAAACCTCTAATCAATCTCAGCATTTTCACCATTCTCAGGCCCAGAGTTTCGGAGCTCCGGCGGCGTCGTTATCGATGAATCAAACGCCGGCGGCGAGTGGTTCAGCTGGTGGAGCGCAGCCAAAGCAACAGAAAGTTAGGGCTCGTAGAGGACAAGCAACTGATCCTCACAGCATTGCTGAAAGATTACGGAGAGAGAGAATTGCAGAGAGAATGAAGTCTTTGCAGGAGCTGGTACCTAATGCCAATAAGACAGACAAAGCTTCAATGTTAGATGAGATCATCGATTATGTCAGGTTCCTCCAGCTCCAAGTCAAAGTTCTGAGTATGAGCAGATTGGGTGGTGCTGCAGCTGTTGCTCCCCTAGTTGCTGATAGATCCTCTGAGGGAGGAGGTGATTGTGTACAAGGAAATGTAGGTCGAGGTGGCAGTAATGGAACGACGTCGTCTGCAAACAACGACAGCAGCATGACGATGACGGAGCACCAGGTAGCTAAGCTAATGGAAGAAGATATGGGATCAGCCATGCAGTATCTTCAAGGAAAAGGCTTATGCCTTATGCCAATTTCCTTAGCCACAGCTATTTCCACCTCCACGTGTCACTCCATGAAACCCAACAACCCACTACTACTCGCCGGAGGCTCCGCCATTAACGGCGTTGGTGAGACCGGCGGTGGACCGTCTTCTCCTACCTTGTCGGCTTCCACTGTTCAGTCAGCTACGATGGGCAATGGCGGGACTTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g010170.1.1SL2.50ch12:3285766..3293079388-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g010170.1SL2.50ch12:3285767..32930797,313-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g010170.1.1.1SL2.50ch12:3292714..3293079366-n/a
exonexon:Solyc12g010170.1.1.2SL2.50ch12:3292473..329256593-n/a
exonexon:Solyc12g010170.1.1.3SL2.50ch12:3291940..3292086147-n/a
exonexon:Solyc12g010170.1.1.4SL2.50ch12:3291715..329178066-n/a
exonexon:Solyc12g010170.1.1.5SL2.50ch12:3288020..328808566-n/a
exonexon:Solyc12g010170.1.1.6SL2.50ch12:3287240..328730869-n/a
exonexon:Solyc12g010170.1.1.7SL2.50ch12:3285767..3286123357-n/a
intronintron:Solyc12g010170.1.1.2SL2.50ch12:3292566..3292713n/a-n/a
intronintron:Solyc12g010170.1.1.3SL2.50ch12:3292087..3292472n/a-n/a
intronintron:Solyc12g010170.1.1.4SL2.50ch12:3291781..3291939n/a-n/a
intronintron:Solyc12g010170.1.1.5SL2.50ch12:3288086..3291714n/a-n/a
intronintron:Solyc12g010170.1.1.6SL2.50ch12:3287309..3288019n/a-n/a
intronintron:Solyc12g010170.1.1.7SL2.50ch12:3286124..3287239n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17995477%2Fdetails feature 17995477
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