Sol Genomics Network

Solanum lycopersicum gene Solyc12g010860.1

Name Solyc12g010860.1	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc12g010860	Length 2,626

Description

14-3-3 protein beta/alpha (AHRD V1 **-- 1433B_XENTR); contains Interpro domain(s) IPR000308 14-3-3 protein

Location(s)

SL2.50ch12:3781557..3784182

GFF source

ITAG_eugene

From BOGAS: 1

Length: 2626

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc12g010860.1.1	SL2.50ch12:3781557..3784182	786	-	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc12g010860.1 SL2.50ch12:3784182..3781557 (sequence from reverse strand)
ATGGCTTCATCCAAAGAACGTGAAAGCTTGGTATACATCGCCAGGCTTGCTGAGCAAGCTGAACGCTACGATGGTTAGGGTTTTGTTTTCTTCTTCATGTAAATCAAATAGATGATTTTTTTAATCTTATTATATGCATAGATCTAAGTTTAATGTATATGTATCTTTAGTCTACTTGCTTAACTAGAATAATTTTAGCAAAAGAGTTGATAATCAAAATAGCAAACTTCATTGCTTCGAAATTTTAAGTTTTAGTTAGTTGCTAAGGTGCCTTAGTTTAACTGGTAAAGTTGTTTTGAGCAGAAATGATTTTGCTTACCATAGATCCTTATGGTCTGGAGGTTGATAATTAGCGTAGAAGGTTTGAATGAAATCGGGCAATAGAGTAGTAGTTTTATTCTTGTTTAGAAGGAAGTCGGTCTATTGGAAACAACGTCTCTACCTTCTTAAGATAGGGGTAAGATAAGGTTTACGTACATTCTACCCTCCCCAATACTAGACTCCACTTGTGGGATTACAGTGGGTTTCTTGTTGCTGTTGGGTGTTCATAACAGATTCACTGTTGATTACCTTTGCTTAAGTTTTTCGTATGTTACAGAGATGGTTGATGCAATGAAGAATGTTGCGAATCTGGATGTTGAACTGACAGTGGAGGAGAGGAATTTGTTATCTGTTGGTTATAAGAATGTGGTTGGATCTAGGAGAGCGTCATGGAGGATCTTGTCTTCCATCGAGCAGAAGGAAGATGCTAGAGGAAATGAGCAGAATGTGAAGCGGATCCAGGGGTACCGCCAAAAAGTAGAGTCAGAGCTCACCGACATTTGCAATAATATCATGACTGTGATTGATGAGCATCTGATTCCGTCATGTACTGCTGGTGAATCAACTGTGTTTTACTACAAAATGTGAGGCTTGGTGTATTGTTTGTTTTGAGTCGAAAACATTGAGTTTGTTTTTCTGGAAATTAAGAACTTCATCGGTTGTTCATTTTAGTCAGTTTGCTTTATCTTTGGGTGCAGGAAAGGAGATTATTATCGATATCTTGCAGAGTTCAAAACAGGTGATGACAAGAAAGAAGTTTCTGATCTGTCTTTAAAAGCATATCAGGTATGCAATTGCTATAAACCTGTAAGAAGACAATAATCATCTCGTTTTCTGCTAAACAAGAAGACACTGATACATATTGTCAGTCGTATGTTTGATTGTTTCTAAAGTGAACGCTAGCATAGTTCTGCTAAGCAGCCTTTACATTGCTGTTGGAATTAAGGGCTTTTCCAAATGGAATTTGGTGGCATTTTCAAGATCTTAACTTCATAACACTTTAAATATTATGTAGAGCCTCTTTACCTGTCCCTTTCTCCCGTTCCCGTATCTTTCACGTTTTAAGTATAGTGTTTGTATTTGTTTTCTTAACATGCATATCGTATTTCTATCTACTTCCACTTACTGGTCATTCTAAACTGTGTACAGACGGCTACAACTACTGCAGAAGCTGAATTACCAATTACCCATCCCATCCGGTTGGGTTTGGCTTTAAATTTCTCTGTTTTCTACTATGAGATAATGAACTCTCCTGAAAGGTTTGTGCGGTTTTGTGTTTATCGTAGTTTATCCACACACATTCTTCAATCTCAGTTGATTATACTCTGTTTTCTTCAGGGCTTGCCAATTGGCTAAGCAGGTTTTTGATGAAGCAATATCTGAGCTGGATAGCCTCAATGAGGACAACTACAAAGATGGTACCTTAATTCTGCAGCTTCTTAGGGACAATCTCACCTTGTGGACGTCTGACATTCCAGAGGATGGAGGTATGTGCCTGTCTTGATCTCAAGGTTGCTTTGGTGCTTACATAATCCTCATAGCTGGTTCATTAACTTTCTACCTGCTCTTTTCTCCTCGTAATTGGATGAGAGAGATCTTTAGAAGAACTAGTTCATCTGCAATCTTTTAGATGACATTCAGTGTGGAATGCACTGTACTGTTACTCTATTATTTTCGGGAATTAGAACACCAGGCAGCAAAAATATAAGTTTTAGGCATCCCTTTTTGTTTGATCGGAGAAGGAAGGAATCAGGCTTAGGAGATATTAATATTTTGTAGGACTTCTTTCCTTGTTCATACAGTGTTTTATTAGACATTGGATGTTTACTAAGGTTATATTCTTTAGGCATCAGAATAATTCCGACGGCTGCTCCTCTACTTGTAATTGAGGCGACCTTAATTGACACTGGTAGTTTCACACGCACTTCATTTGAATGTGCATTTGCAGTTAGGAATTGTTGCCTTTAGAAAGGTTTTATGATTAATATGAAGCACATATAGTTTGAGTTGACAAGGCTATAACAAAGATCCTCATCCTCCATGACACTACAATAATTCAACTGTATTGAATGTAATATTGTCCTATTTCACTATTAAGAGAAAACTTCAACTTTACATATTATTCATGTTGAATCTTTTTTTTCCGGTCCTAATAGAAGAGGCTCCAAAGGGAGATGCTGCAAACAAAGTGGGTGCAGGCGAGGATGCGGAGGTGGGTTCTTCATTCATCTTTGTCTCTGTTTTGGTATAATAAAGCTTCCCTATTCATTCTAAACCACATCTTTTTGGTGTGCTCTTGCAGTGA

Download sequence region

Download sequence (2.6Kb)

Get flanking sequences on SL2.50ch12

mRNA Solyc12g010860.1.1

Ontology terms

terms associated with this mRNA

GO:0019904 – protein domain specific binding

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc12g010860.1.1	SL2.50ch12:3781556..3784182	262	-	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc12g010860.1	SL2.50ch12:3781557..3784182	2,626	-	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc12g010860.1.1.1	SL2.50ch12:3784110..3784182	73	-	n/a
exon	exon:Solyc12g010860.1.1.2	SL2.50ch12:3783278..3783584	307	-	2
exon	exon:Solyc12g010860.1.1.3	SL2.50ch12:3783076..3783163	88	-	1
exon	exon:Solyc12g010860.1.1.4	SL2.50ch12:3782603..3782712	110	-	n/a
exon	exon:Solyc12g010860.1.1.5	SL2.50ch12:3782375..3782523	149	-	1
exon	exon:Solyc12g010860.1.1.6	SL2.50ch12:3781650..3781705	56	-	2
exon	exon:Solyc12g010860.1.1.7	SL2.50ch12:3781557..3781559	3	-	n/a
intron	intron:Solyc12g010860.1.1.2	SL2.50ch12:3783585..3784109	n/a	-	n/a
intron	intron:Solyc12g010860.1.1.3	SL2.50ch12:3783164..3783277	n/a	-	n/a
intron	intron:Solyc12g010860.1.1.4	SL2.50ch12:3782713..3783075	n/a	-	n/a
intron	intron:Solyc12g010860.1.1.5	SL2.50ch12:3782524..3782602	n/a	-	n/a
intron	intron:Solyc12g010860.1.1.6	SL2.50ch12:3781706..3782374	n/a	-	n/a
intron	intron:Solyc12g010860.1.1.7	SL2.50ch12:3781560..3781649	n/a	-	n/a

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Related views

Genetic loci

Tomato locus tft8

http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17996159%2Fdetails feature 17996159

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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