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Solanum lycopersicum mRNA Solyc12g013840.1.1

mRNA details  
Name
Solyc12g013840.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g013840.1.1
Length
2,589
  
Description
WD-40 repeat protein (AHRD V1 *--- B7KCU4_CYAP7); contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat, region
Location(s)
SL2.50ch12:4630904..4638122
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006468
Length
7219
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g013840.1.1 WD-40 repeat protein (AHRD V1 *--- B7KCU4_CYAP7); contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat, region

ATGGAGGGTTCATCTCAGTCTGGTAGGGAGAGGTCTGAGAGTTCAAGGGGTTTGAATAGTTCAGGTGTTGTGGATTGGAATTCAAGATTTCGTTCTGCAAGTACTATAAGGCTGTCTAGTGATGCATCTCATGATTCTGGATTTGTTTCAAAAGGGTGGGAAAGAATTGAGTCATCTGATGTTAATTGCGTTAAAGATCAAGGGGTTCGAGGTATCGATCGTAAAGATGTTAGTTTGAGGCATTGGTTGGATAATCCAGAAAGAACTGTTGATTCACTTGAATGTATGCATATATTTACTCAGATTGTAGAGATTGTAAAACTCGCACATACTCAAGGGATAGCTGTGCATAATGTGCGCCCATCATGTTTTGTTATGTCTTCATTTAACCGTGTTGCGTTTATTGAATCTGCTTCCTGCTCTGATTCGGGATCGGATTCATGTGAAGATGAACCAAACAGTTCATCTTCACCTTTGCAACTTGAGATGATTCCTGGGAAGGACTCTGCTATAGCATCTGAAAGCAGTTGCTTGCAGTCAAGTTCAGGTCATATGGTGCAGACTTTGGAAGCTAATAAGAATAGACAAGAGGAAGATAACAACAAGCATAATTTTCCAATGAAACAGATATTGCACTTGGAAACTAATTGGTATACTAGTCCAGAAGAGGTTAATGATGCTCCAGGCACTTGTGCTTCAGACATTTATCGACTCGGAGTGCTTCTCTTTGAGCTATACTGCACCTTCAACTCATCAGATGAGAAAATTGCAAATATGTCATGTCTAAGACATCGTGTCCTACCCCCACAGTTGTTGTTGAAATGGCCTAAGGAAGCTTCATTTTGCTTATGGTTACTACACCCGGACCCAAGTAGTCGGCCAAAAGTGGGTGAGTTGCTAGAAAGTGAGTTCCTTAAAACTCCAAGGCATGACTTGGAAGAACGTGAAGCAGCGATAGAGCTTAGAGAAAAAATAGATGAGCAGGAATTATTACTGGAGTTCCTTTTACTAATCCAACAGAAAAAGCAGGAGGCTGTGGAAAATTTGCACGAAATTGTGTCTTTTTTGTCGTCTGATGTAGAAGAAGCCACTAAGATGCAGACAACCCTCAAATTAAAAGGAGGCTCAAGCGTAGAAAAAGCAGAAGAGGCCACTAAGATGAAAGGAGGCTCAAGCTTAGAACCAGCTAAGCATTTGAATTCTCGGAGGACAAATATTACTGAAGATCACGATTCAGGGAGCTCTGGATCTCGAAAGAGGTCTAGGCCTAGCACAGGTGAGGAATCTGATGGCCGTCCAGATGAAAGCCAGAAATTCGAAAGGCATATTGAAAATAAAAGCAGCATTTCGGCAAAAAGTTCTCGGTTGATGAAAAACTTCAGAAAATTGGAGGCAGCTTATTTCATGACGAGACGCAGGGTTATTAAAAGGGACAAATCTATGAGTAGAAACTGTCAAACAAGTCCGGAATGTAAAAGTTCCGCTACAGCTACTGAAAGGAGTTCTCTGAGTAATTTGTCATCAAAGGGAGGGTGCAATGGTGATAGACAGAGGGGATGGATCAATTCATACTTGGAGGGCCTATGCAAGTACTTCTCTTTTAGCAAGTTAGAAGTGAAGGCAGATTTAAAGCAAGGGGATCTTCTAAACCCTTCCAATCTCGTATGTTCTCTCAGCTTTGATCGTGATGGTGAATTTTTTGCAACTGCTGGTGTAAATAAGAAGATCAAAGTTTTTGAATATAACTCAATTCTAAATGCGGATCGTGACATACACTATCCAGTCGTTGAAATGGCTAATAGATCAAAGTTGAGCAGTATATGTTGGAACGGCTATATCAAAAGCCAGCTTGCCTCAAGTAACTTTGAAGGTGTGGTGCAGGTATGGGATGTCACAAGAAGTCAGCTTTTCATGGAGATGAGAGAGCATGAGAAACGTGTCTGGTCTGTTGATTTTTCTTTAGCAGATCCAACCATGTTGGCAAGTGGGAGCGATGATGGTTCTGTGAAGCTTTGGAATATCAATCAGGGAGTCAGTGTTGGAACGATAAAAACAAAAGCCAATGTCTGCTGTGTTCAGTTCCCTGTTGATTCAGGTCGGGCCCTTGCTTTTGGTTCAGCAGATCATAAGATATATTACTATGACCTACGAAACTCGAAGTTGCCTCTATGCACATTAATTGGGCACAACAAGACAGTGAGCTATGTCAAGTTCATAGATTCAACAACTCTTGTGTCTGCATCTACGGACAATACAATAAAGCTGTGGGATCTGTCAACATGCACATCTCGTATTCTTGATTCTCCTCTTCAGTCATTTACTGGACATATGAATGTAAAGAACTTTGTTGGCCTATCTGTATCTGATGGTTACATAGCAACTGGCTCAGAGACAAATGAGGTTGTCATCTACCACAAAGCTTTTCCCATGCCAGCATTGTCATTTAAATTTAACTGCACAGATCCGCTTTCTGGTGATGAAGTGGACGACAGTGCACAGTTCATCTCATCTGTGTGTTGGCGTGGTCAGTCCCCTTCTTTAGTTGCCGCAAATTCTATGGGAAATATCAAGCTCTTGGAGATGGTATAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g013840.1.1SL2.50ch12:4630903..4638122863+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g013840.1SL2.50ch12:4630904..46381227,219+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g013840.1.1.1SL2.50ch12:4630904..4631635732+n/a
exonexon:Solyc12g013840.1.1.2SL2.50ch12:4631748..4631905158+n/a
exonexon:Solyc12g013840.1.1.3SL2.50ch12:4632663..4633653991+1
exonexon:Solyc12g013840.1.1.4SL2.50ch12:4633731..4633877147+n/a
exonexon:Solyc12g013840.1.1.5SL2.50ch12:4634006..4634317312+n/a
exonexon:Solyc12g013840.1.1.6SL2.50ch12:4635918..463597760+n/a
exonexon:Solyc12g013840.1.1.7SL2.50ch12:4637934..4638122189+n/a
intronintron:Solyc12g013840.1.1.1SL2.50ch12:4631636..4631747n/a+n/a
intronintron:Solyc12g013840.1.1.2SL2.50ch12:4631906..4632662n/a+n/a
intronintron:Solyc12g013840.1.1.3SL2.50ch12:4633654..4633730n/a+n/a
intronintron:Solyc12g013840.1.1.4SL2.50ch12:4633878..4634005n/a+n/a
intronintron:Solyc12g013840.1.1.5SL2.50ch12:4634318..4635917n/a+n/a
intronintron:Solyc12g013840.1.1.6SL2.50ch12:4635978..4637933n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17997111%2Fdetails feature 17997111
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