Solanum lycopersicum mRNA Solyc12g015880.1.1

mRNA details  
Name
Solyc12g015880.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g015880.1.1
Length
2,100
  
Description
Heat shock protein 90 (AHRD V1 ***- Q14TB1_TOBAC); contains Interpro domain(s) IPR019805 Heat shock protein Hsp90, conserved site IPR018249 EF-HAND 2 IPR001404 Heat shock protein Hsp90
Location(s)
SL2.50ch12:5868004..5871038
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005524
  • GO:0006950
Length
3035
Nb exon
3
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g015880.1.1 Heat shock protein 90 (AHRD V1 ***- Q14TB1_TOBAC); contains Interpro domain(s) IPR019805 Heat shock protein Hsp90, conserved site IPR018249 EF-HAND 2 IPR001404 Heat shock protein Hsp90

ATGGCGGAGGCAGAGACGTTTGCATTTCAAGCTGAGATCAACCAGCTTCTGAGTCTCATCATCAATACTTTTTATAGTAACAAAGAGATCTTTCTCAGGGAACTCATTAGTAACTCTTCTGATGCACTGGACAAGATCCGTTTCCAGAGTTTGACTGACAAGAGCAAGCTAGATGCTCAACCTGAACTTTTCATTCACATCGTCCCTGACAAGACCAACAATACCCTCACAATCATTGACAGTGGTGTTGGTATGACAAAGGCTGATCTGGTGAACAACCTTGGTACAATTGCTAGGTCTGGCACCAAGGAATTTATGGAGGCCATTGCTGCTGGTGCTGATGTTAGCATGATCGGGCAATTTGGTGTTGGTTTCTATTCTGCTTATTTGGTTGCTGAGAGGGTGGTTGTGACCACAAAGCACAATGATGATGAACAATATGTTTGGGAATCACAAGCTGGTGGTTCATTCACTGTTACGAGAGATACATCTGGTGAGAACCTTGGCAGGGGTACCAAAATGACCCTCTTCCTCAAGGAGGACCAGCTTGAATACCTTGAGGAGCGAAGGCTCAAGGACCTTATTAAGAAGCATTCTGAGTTCATCAGCTATCCAATCTCTTTGTGGGTTGAGAAGACCATAGAAAAGGAAATCTCGGATGATGAGGACGAAGAGGAGAAGAAAGATGAGGAAGGAAAGGTAGAGGAGGTTGATGAAGAAAAGGAGAAGGAAGAGAAGAAAAAGAAGAAAATTAAGGAAGTCTCTAATGAGTGGTCATTGGTTAATAAGCAGAAGCCCATATGGATGAGGAAGCCCGAGGAGATCACAAAAGAGGAGTATGCTGCATTCTACAAGAGCCTGACAAATGATTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAAGGTCAGCTTGAGTTTAAGGCTGTTCTTTTTATTCCAAAGAGAGCTCCTTTTGACCTCTTTGACACCAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTCATCATGGATAACTGTGAGGAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAAGATCTTCCCCTCAACATCTCTAGAGAGATGTTGCAGCAGAATAAGATCCTGAAGGTTATTCGCAAAAACTTGGTGAAGAAGTGCATTGAGCTATTCTTTGAAATTGCTGAAAACAAAGAAGACTATAACAAGTTCTATGAGGCCTTCTCAAAGAACCTCAAGCTTGGTATCCATGAGGATTCACAGAACAGGTCTAAGTTTGCTGAACTGCTGAGATATCACTCCACAAAAAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGGATGAAAGAAGGCCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCACCCTTCCTTGAGAAGCTGAAGAAGAAGGGTTATGAGGTTCTTTACATGGTTGATGCTATTGATGAGTATTCAATTGGTCAATTGAAGGAATTTGAGGGTAAGAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGAGGAGACTGAAGATGAGAAGAAAAAGCAAGAAGAACTAAAGGAGAAGTTTGAGGGTCTTTGCAAGGTGATTAAGGATGTTCTAGGTGACAAGGTTGAGAAAGTGGTGGTCTCTGACCGTGTAGTGGATTCTCCTTGCTGCTTGGTTACTGGAGAGTATGGTTGGACTGCCAACATGGAGAGAATCATGAAGGCACAAGCTCTCAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAGATCAATCCTGAGAATGCCATCATGGATGAGCTCAGGAAGAGAGCTGATGCTGATAAGAATGACAAGTCCGTCAAGGATTTGGTTCTATTGTTGTTTGAGACTGCTCTTCTCACTTCAGGTTTTAGCCTTGATGAGCCAAACACATTTGGCAACAGAATTCACAGGATGCTGAAGCTTGGTCTGAGTATCGATGAGGATGGTGGAGATGCTGAAGCTGACATGCCAGCATTGGAGGATCCTGAAGCTGATGCCGAGGGCAGCAAGATGGAAGAAGTCGACTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g015880.1.1SL2.50ch12:5868003..5871038700-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g015880.1SL2.50ch12:5868004..58710383,035-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g015880.1.1.1SL2.50ch12:5870916..5871038123-n/a
exonexon:Solyc12g015880.1.1.2SL2.50ch12:5869942..5870083142-n/a
exonexon:Solyc12g015880.1.1.3SL2.50ch12:5868004..58698381,835-2
intronintron:Solyc12g015880.1.1.2SL2.50ch12:5870084..5870915n/a-n/a
intronintron:Solyc12g015880.1.1.3SL2.50ch12:5869839..5869941n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17998397%2Fdetails feature 17998397
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