Solanum lycopersicum mRNA Solyc12g035130.1.1

mRNA details  
Name
Solyc12g035130.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g035130.1.1
Length
1,839
  
Description
ATP dependent RNA helicase (AHRD V1 ***- B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch12:60087026..60093040
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005515
  • GO:0005524
Length
6015
Nb exon
8
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g035130.1.1 ATP dependent RNA helicase (AHRD V1 ***- B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

ATGGCTGCTATTTTAACTGCATCATCTGGTCCAAGCTATGCACCAGAAGACCCCACTCTCCCCAAACCTTGGAAAGGCCTAGTTGATGGTACAACAGGATATATCTACTTCTGGAATCCAGAGACCAATGATACCCAATATGAGAGGCCTGTTCACTCATCCAATGGAGTGTCTGCTCTAGCACAAAAGTCAGCTGTATTTGTTAGTTCATCTGTCCAAAAACCCTCTCAAGGTCAACATTATGATCCAGACGGTAGGCATAGCAGAGGTAGCAACAACAAGGTTACATCCCTGAAGGGAGATCAGAATGCGAGAAGCAGTTCTGATCATCACGAAGGCTATGATTCTCTAGGTGTAGGAACTGACATATCTCAGGAATCCTATTGCCGCCACAATGAGATCTCTGTTACGGGAGGTGATGTTCCTGCACCTTTGACATCATTTGAAGCGACTGGGTTTCCTTCAGAGATTGTGAGGGAGATGCGTCAAGCTGGGTTTTCAGCTCCTACTCCAATTCAGGCACAATCGTGGCCTGTTGCCCTTCAGGGCCGTGACATAGTAGCTATTGCCAAGACTGGGTCTGGGAAAACTTTGGGTTACTTAATTCCAGGCTTTATTCATCTAAAAAATCGCCGCAGTAATCCTCAATTAGGCCCAACTATTTTGGTTCTCTCACCAACAAGAGAGTTAGCGACACAGATACAAGCTGAAGCTGTGAAGTTTGGGAAATCCTCTAGGATATCTTGCACGTGCTTGTATGGAGGTGCTCCAAAAGGTCCTCAACTTCGAGAGTTGAGTAGGGGTGTAGATATTGTTGTCGCCACTCCTGGTCGTTTGAACGACATATTGGAAATGAGAAGGCTTAGTCTTGGTCAAGTTTCTTACCTGGTGTTAGATGAAGCAGATCGTATGCTGGACATGGGATTTGAACCTCAGATAAGAAAGATTGTGAAAGAGGTGCCTAAGCAGAGGCAGACATTGATGTATACAGCTACATGGCCAAAGGGGGTTCGTAAGATTGCAGCTGATCTATTGGTTAATTCAGTTCAGGTTAATATTGGTAATGTTGACGAGCTTGCTGCAAACAAGTCTATAACACAGCACATTGAAGTCTTGTCTTCGATGGAGAAACAACGGCGACTAGAACAAATTTTGAGATCCAATGAACCAGGGTCAAAGATCATTATCTTCTGTTCAACAAAGAAAATGTGTGACCAACTATCTCGCAATCTTACTCGCAACTTTGGAGCAGCTGCAATTCATGGGGATAAATCTCAGGGTGAGAGGGATTATGTATTAAGTCAGTTCCGCACTGGCAGGTCTCCCGTGCTTGTGGCTACTGATGTTGCTGCGCGGGGTTTAGACATCAAAGATATCAGGGTGGTGGTGAACTTTGACTTCCCAACTGGAATAGAGGATTATGTCCACAGAATTGGTAGGACAGGTCGGGCAGGGGCATCTGGTCTGGCCTATACATTTTTCTCCGATCAGGATGCTAAGCATGCTTTAGATCTTGTTAAAGTTTTAGAAGGTGCAAATCAATCTGTCCCAACTGAACTGCGTGATATGGTTTCGCGAGGTGGTGGTATGGGAAAGGCAAGGTGGGGTTCTGGTCAAGGTGGACGTGGTGGGCGCTTCAATGGAAGCTATGTTAGCCGGAATGGAGGAAGGGGAGACTGGAATAATTCGTCATCAGAAAGAGGCGGAGGACGTGGTTATGACCGGGGATCACGCGATAGTGACAGATTTCTACGTGGGGATGCTTCAAGGAAGCGTAGTCGCAGCAGAAGCCCCAACAAGGGTTCAGGATGGAGTGATAAAAAGAGCCGGTTTGCCTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g035130.1.1SL2.50ch12:60087025..60093040613-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g035130.1SL2.50ch12:60087026..600930406,015-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g035130.1.1.1SL2.50ch12:60092735..60093040306-n/a
exonexon:Solyc12g035130.1.1.2SL2.50ch12:60092141..60092245105-n/a
exonexon:Solyc12g035130.1.1.3SL2.50ch12:60090657..6009072569-n/a
exonexon:Solyc12g035130.1.1.4SL2.50ch12:60089870..60090139270-n/a
exonexon:Solyc12g035130.1.1.5SL2.50ch12:60088931..60089281351-n/a
exonexon:Solyc12g035130.1.1.6SL2.50ch12:60088490..60088767278-n/a
exonexon:Solyc12g035130.1.1.7SL2.50ch12:60087207..60087566360-1
exonexon:Solyc12g035130.1.1.8SL2.50ch12:60087026..60087125100-1
intronintron:Solyc12g035130.1.1.1SL2.50ch12:60092246..60092734n/a-n/a
intronintron:Solyc12g035130.1.1.2SL2.50ch12:60090726..60092140n/a-n/a
intronintron:Solyc12g035130.1.1.3SL2.50ch12:60090140..60090656n/a-n/a
intronintron:Solyc12g035130.1.1.4SL2.50ch12:60089282..60089869n/a-n/a
intronintron:Solyc12g035130.1.1.5SL2.50ch12:60088768..60088930n/a-n/a
intronintron:Solyc12g035130.1.1.6SL2.50ch12:60087567..60088489n/a-n/a
intronintron:Solyc12g035130.1.1.7SL2.50ch12:60087126..60087206n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F18001046%2Fdetails feature 18001046
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