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Solanum lycopersicum mRNA Solyc12g035500.1.1

mRNA details  
Name
Solyc12g035500.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g035500.1.1
Length
2,061
  
Description
Endoplasmic reticulum metallopeptidase 1 (AHRD V1 **-- ERMP1_XENLA); contains Interpro domain(s) IPR007484 Peptidase M28
Location(s)
SL2.50ch12:57585233..57612575
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006508
Length
27343
Nb exon
15
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g035500.1.1 Endoplasmic reticulum metallopeptidase 1 (AHRD V1 **-- ERMP1_XENLA); contains Interpro domain(s) IPR007484 Peptidase M28

ATGACTTGTTTCCCTGACCAAATTATCTACTCTATGAGGAGAGTTATTAAGTTATTAAATCTTCCATCTCTATGCCATTGCTATTGTTATAATTTTCACCCGCTGTGCATTGTTGGATTTACAGATTTGGTTTGCCAATCTGGACCTGGGTCCTGGCCTTCATATGTTTATGCTCAATCAGCACTCTATCCTATGGCAAATAGTGCAGCTCAGGATATCTTTGGTATAATACCTGGTGATACAGACTACAGAATGTTTGCACAAGATTTTGGCGATATTCCTGGCCTAGATATCATCTTCCTCCTTGGGGGTTATTTTTATCATACCGCATCTGATACTGTTGAAAGACTATTGTATGCATCACAATTACCTGGAAGCATCCAAGCACGTGGAGACAATTTATTAAGAATAATCAAAGCCTTCACCAACTCATCTAACCTGCAAAATGCACATCAAAGGAAATTAAGATCTGCTGTCAATAGATCTGACAATGAACGTGCAATTTTCTTTGATTACTTGTCGTGTTTCTTGGTATACTATTCACGAAAGCAAGCTATGTTTCTTCATTGTTTACCTGTTGTCATCTTTTTTCTTGTGCCACTTCTCCTACGCTTTCCAACTTGGGGACTGACCTATTGTTTTGCAGCCTTTTATGATTTTCTTAAAGGAATGCTATGTCATGCTTTTGCAATTTTGCTAGCAATTGTTTTTCCTGTTGCCTTTGCTGTCATAAGACTGCTGTTTGCTGGTCAGTCAATGAACTGGTTTTCCACGCCATATTTGGCATTCATGATGTTTATACCTAGTTCACTTGCTGGGATGTTGATTCCAAGAATGCTATGGAAAAGCTTCCCTCTGACTCAAGATGTTTCTATCCTGAAGTTGTCGAAAGAGGAACTAGTTTCTGAAGCTAGATTTTGGGGAGCATTTGGGTTATATTCGATTTTAACAATGGTTTACCTTGTTGTGGGGCTGAGTGGAGGTTTCTTGACATTTGTTATGTCAGCATTCATGCTTCTTGCTTGGATTTCCTTTCGCCTTTCTATGAAGTCATTTATTGTTGGATCATTTAGGTCAACTGCATGTTATGTGATCCCTCTCATTCCTTGTATAATGTACATGGTGTATTTTGGCGGATTTCTTGTTGCTTTTGTGATTGAAAAAATGGGCATGACAGGCTCACTCCCCCCACCTTTTGGTTACTTCATTCCTGATGTTATAGTGGCAGCAATTATTGGACTGGTGACTAGTTGGTCTGTTGGACCTATTTTGCCTGTTGTGGCCCACTGGTTAGCCAGGTCATCTATACTGCATTTTTTGCTACACAGCAGCATTCTCGCTTTGGCTCTTTCATCACAATTCTTTCCGTACAGTACCGATGCACCTAAAAGAGTTATATTCCAGCATACTATCCGAAATGCAGGTGCCAGTAAAATTATGGAAACTACCTATGATTTTGCCGTCGTTGACTCCAACACTCTGCCTTTCGTTTTCAAGCATGCCCCTGAAGTGGCCAACACACTGCACATTAATACAGAATTATCCTTTGATGCTGTCAAGCAGTCTCATCAAGAAGAGTGGATGGGCATATTTCCAATATCTTCTCTGTTTTCTAGATGCATGAAGTTTCCTGCAAAAGGATCAGATGTCTCGGCTGAATACAATCATTTCCCACACCTAACGACTAATAAGCCACAAGAGAGCTTGAGTGGGGGTTCCCGTAGGATCTACTTGGAGTTCTCCCTCGGTTCCTTGAAGGAAGTGTGGGTTGCAGTCCTTAATATTACTGGTTCGCTATCCAGCTGGTCATTTGCAGATAACGTTCTTCCAGTTCCTGAGAAGACTGGTAATGGTCCGCCATCATATATATGTAGATTAAGTGGTGCAGGCGATAAAAACTGGACCTTTTGGTTGGAGGCAAACAGTTCCGAGTCCATTAAGATTGATGTGGCTGTAGTGGACCAGTATCTGACAGAGTCTGCTGCTAAATTGAAAGCCATTTTTCCAGATTGGGTCGATGTGACTGCATTCTCTAGTTTTATATCTGCCTATGTTTTCTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g035500.1.1SL2.50ch12:57585232..57612575687-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g035500.1SL2.50ch12:57585233..5761257527,343-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g035500.1.1.1SL2.50ch12:57612363..57612575213-n/a
exonexon:Solyc12g035500.1.1.10SL2.50ch12:57594921..57595145225-2
exonexon:Solyc12g035500.1.1.11SL2.50ch12:57592929..57593089161-2
exonexon:Solyc12g035500.1.1.12SL2.50ch12:57592193..57592356164-n/a
exonexon:Solyc12g035500.1.1.13SL2.50ch12:57590805..5759088783-1
exonexon:Solyc12g035500.1.1.14SL2.50ch12:57590640..5759072586-2
exonexon:Solyc12g035500.1.1.15SL2.50ch12:57585233..57585376144-n/a
exonexon:Solyc12g035500.1.1.2SL2.50ch12:57612091..57612245155-n/a
exonexon:Solyc12g035500.1.1.3SL2.50ch12:57611835..57611997163-1
exonexon:Solyc12g035500.1.1.4SL2.50ch12:57607409..57607544136-n/a
exonexon:Solyc12g035500.1.1.5SL2.50ch12:57607216..5760731297-2
exonexon:Solyc12g035500.1.1.6SL2.50ch12:57606384..57606513130-1
exonexon:Solyc12g035500.1.1.7SL2.50ch12:57604535..5760459460-n/a
exonexon:Solyc12g035500.1.1.8SL2.50ch12:57604265..57604383119-n/a
exonexon:Solyc12g035500.1.1.9SL2.50ch12:57603989..57604113125-1
intronintron:Solyc12g035500.1.1.1SL2.50ch12:57612246..57612362n/a-n/a
intronintron:Solyc12g035500.1.1.10SL2.50ch12:57593090..57594920n/a-n/a
intronintron:Solyc12g035500.1.1.11SL2.50ch12:57592357..57592928n/a-n/a
intronintron:Solyc12g035500.1.1.12SL2.50ch12:57590888..57592192n/a-n/a
intronintron:Solyc12g035500.1.1.13SL2.50ch12:57590726..57590804n/a-n/a
intronintron:Solyc12g035500.1.1.14SL2.50ch12:57585377..57590639n/a-n/a
intronintron:Solyc12g035500.1.1.2SL2.50ch12:57611998..57612090n/a-n/a
intronintron:Solyc12g035500.1.1.3SL2.50ch12:57607545..57611834n/a-n/a
intronintron:Solyc12g035500.1.1.4SL2.50ch12:57607313..57607408n/a-n/a
intronintron:Solyc12g035500.1.1.5SL2.50ch12:57606514..57607215n/a-n/a
intronintron:Solyc12g035500.1.1.6SL2.50ch12:57604595..57606383n/a-n/a
intronintron:Solyc12g035500.1.1.7SL2.50ch12:57604384..57604534n/a-n/a
intronintron:Solyc12g035500.1.1.8SL2.50ch12:57604114..57604264n/a-n/a
intronintron:Solyc12g035500.1.1.9SL2.50ch12:57595146..57603988n/a-n/a
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http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F18001321%2Fdetails feature 18001321
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