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Solanum lycopersicum mRNA Solyc12g036470.1.1

mRNA details  
Name
Solyc12g036470.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g036470.1.1
Length
819
  
Description
Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch12:51995488..51997725
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2238
Nb exon
6
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g036470.1.1 Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGGCTCATCATTATTTCAATCCAGATATGCAAATCATTATTCCACCATCCTCTGTATTTAACACTGACACAAATTTGAATTTTCATAACCAATTTCCAGAACAAAATTACTTGAATACCATTTCACTGGAAATGTCTAATTTCAATTTTCATAAGCACTCTGATGAACATATTTTGAACCAAACCTCTGACTTCCCTGTATATTTAACAGAAAATTTCCAACAAGATATGTTCAACCTTCCAGTACCAACTAGAAATGATATAAATGAAAGCAAGAAAAGGAAAACAATTGAAACCCCAGAAAGTAGCTCTGCTTACTCATCCCCTGCAGTTTCTTCGAGAAGAAAAACCGGCAAAGGAAGAGGAAAGAGAGTAAAAAGGGATGAAAATGAAGAAGAGAAACTAAGGCAAGTAGTGCATGTAAGAGCCAAGAGAGGCCAAGCAACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGAGGAAAAATTAATGAAAGACTTAGGTGTTTACAAGATATTGTTCCAGGATGCTACAAGTCTATGGGCATGGCAGTAATGCTGGATGAAATAATTAACTATGTGCAATCTTTACAAAATCAAGTTGAGTTCCTCTCAATGAAGCTATCTGCAGCTAGCACATATTATGACTTCAATTCAGAGACAGACATTTTGGAGACAATGCAGAGAGCAAAGGCATATGAAGCAAACATGATGCAGAAGCTAAAGAAAGAAGGATGTGAAGGGATGGGTTCTAATCAAGTTGGCCCTTTAATTGACCGCACTTTTGGCTGCTATCCCAAGTTGTCTTACAACACCTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g036470.1.1SL2.50ch12:51995487..51997725273-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g036470.1SL2.50ch12:51995488..519977252,238-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g036470.1.1.1SL2.50ch12:51997375..51997725351-n/a
exonexon:Solyc12g036470.1.1.2SL2.50ch12:51996635..51996754120-n/a
exonexon:Solyc12g036470.1.1.3SL2.50ch12:51996484..5199654966-n/a
exonexon:Solyc12g036470.1.1.4SL2.50ch12:51995906..5199597469-n/a
exonexon:Solyc12g036470.1.1.5SL2.50ch12:51995743..5199582078-n/a
exonexon:Solyc12g036470.1.1.6SL2.50ch12:51995488..51995622135-n/a
intronintron:Solyc12g036470.1.1.1SL2.50ch12:51996755..51997374n/a-n/a
intronintron:Solyc12g036470.1.1.2SL2.50ch12:51996550..51996634n/a-n/a
intronintron:Solyc12g036470.1.1.3SL2.50ch12:51995975..51996483n/a-n/a
intronintron:Solyc12g036470.1.1.4SL2.50ch12:51995821..51995905n/a-n/a
intronintron:Solyc12g036470.1.1.5SL2.50ch12:51995623..51995742n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F18002024%2Fdetails feature 18002024
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