Solanum lycopersicum mRNA Solyc12g036470.1.1
 mRNA details
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| Name | Type | Organism | |
|
Synonyms / aliases
mRNA:Solyc12g036470.1.1
|
Length
819
|
|
Description
Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
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Location(s)
SL2.50ch12:51995488..51997725
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005634
- GO:0045449
- Length
- 2238
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc12g036470.1.1 Transcription factor (AHRD V1 *-*- D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
ATGGCTCATCATTATTTCAATCCAGATATGCAAATCATTATTCCACCATCCTCTGTATTTAACACTGACACAAATTTGAATTTTCATAACCAATTTCCAGAACAAAATTACTTGAATACCATTTCACTGGAAATGTCTAATTTCAATTTTCATAAGCACTCTGATGAACATATTTTGAACCAAACCTCTGACTTCCCTGTATATTTAACAGAAAATTTCCAACAAGATATGTTCAACCTTCCAGTACCAACTAGAAATGATATAAATGAAAGCAAGAAAAGGAAAACAATTGAAACCCCAGAAAGTAGCTCTGCTTACTCATCCCCTGCAGTTTCTTCGAGAAGAAAAACCGGCAAAGGAAGAGGAAAGAGAGTAAAAAGGGATGAAAATGAAGAAGAGAAACTAAGGCAAGTAGTGCATGTAAGAGCCAAGAGAGGCCAAGCAACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGAGGAAAAATTAATGAAAGACTTAGGTGTTTACAAGATATTGTTCCAGGATGCTACAAGTCTATGGGCATGGCAGTAATGCTGGATGAAATAATTAACTATGTGCAATCTTTACAAAATCAAGTTGAGTTCCTCTCAATGAAGCTATCTGCAGCTAGCACATATTATGACTTCAATTCAGAGACAGACATTTTGGAGACAATGCAGAGAGCAAAGGCATATGAAGCAAACATGATGCAGAAGCTAAAGAAAGAAGGATGTGAAGGGATGGGTTCTAATCAAGTTGGCCCTTTAATTGACCGCACTTTTGGCTGCTATCCCAAGTTGTCTTACAACACCTAA
ATGGCTCATCATTATTTCAATCCAGATATGCAAATCATTATTCCACCATCCTCTGTATTTAACACTGACACAAATTTGAATTTTCATAACCAATTTCCAGAACAAAATTACTTGAATACCATTTCACTGGAAATGTCTAATTTCAATTTTCATAAGCACTCTGATGAACATATTTTGAACCAAACCTCTGACTTCCCTGTATATTTAACAGAAAATTTCCAACAAGATATGTTCAACCTTCCAGTACCAACTAGAAATGATATAAATGAAAGCAAGAAAAGGAAAACAATTGAAACCCCAGAAAGTAGCTCTGCTTACTCATCCCCTGCAGTTTCTTCGAGAAGAAAAACCGGCAAAGGAAGAGGAAAGAGAGTAAAAAGGGATGAAAATGAAGAAGAGAAACTAAGGCAAGTAGTGCATGTAAGAGCCAAGAGAGGCCAAGCAACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGAGGAAAAATTAATGAAAGACTTAGGTGTTTACAAGATATTGTTCCAGGATGCTACAAGTCTATGGGCATGGCAGTAATGCTGGATGAAATAATTAACTATGTGCAATCTTTACAAAATCAAGTTGAGTTCCTCTCAATGAAGCTATCTGCAGCTAGCACATATTATGACTTCAATTCAGAGACAGACATTTTGGAGACAATGCAGAGAGCAAAGGCATATGAAGCAAACATGATGCAGAAGCTAAAGAAAGAAGGATGTGAAGGGATGGGTTCTAATCAAGTTGGCCCTTTAATTGACCGCACTTTTGGCTGCTATCCCAAGTTGTCTTACAACACCTAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc12g036470.1.1 | SL2.50ch12:51995487..51997725 | 273 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc12g036470.1 | SL2.50ch12:51995488..51997725 | 2,238 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc12g036470.1.1.1 | SL2.50ch12:51997375..51997725 | 351 | - | n/a |
| exon | exon:Solyc12g036470.1.1.2 | SL2.50ch12:51996635..51996754 | 120 | - | n/a |
| exon | exon:Solyc12g036470.1.1.3 | SL2.50ch12:51996484..51996549 | 66 | - | n/a |
| exon | exon:Solyc12g036470.1.1.4 | SL2.50ch12:51995906..51995974 | 69 | - | n/a |
| exon | exon:Solyc12g036470.1.1.5 | SL2.50ch12:51995743..51995820 | 78 | - | n/a |
| exon | exon:Solyc12g036470.1.1.6 | SL2.50ch12:51995488..51995622 | 135 | - | n/a |
| intron | intron:Solyc12g036470.1.1.1 | SL2.50ch12:51996755..51997374 | n/a | - | n/a |
| intron | intron:Solyc12g036470.1.1.2 | SL2.50ch12:51996550..51996634 | n/a | - | n/a |
| intron | intron:Solyc12g036470.1.1.3 | SL2.50ch12:51995975..51996483 | n/a | - | n/a |
| intron | intron:Solyc12g036470.1.1.4 | SL2.50ch12:51995821..51995905 | n/a | - | n/a |
| intron | intron:Solyc12g036470.1.1.5 | SL2.50ch12:51995623..51995742 | n/a | - | n/a |
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