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Solanum lycopersicum mRNA Solyc12g044860.1.1

mRNA details  
Name
Solyc12g044860.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g044860.1.1
Length
1,440
  
Description
ATP dependent RNA helicase (AHRD V1 ***- B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch12:37669367..37676235
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
6869
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g044860.1.1 ATP dependent RNA helicase (AHRD V1 ***- B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

ATGAGTCGCTACGATAGCCGTCCGGCGGACCCTGGCTCTTACCGTGACCGTCGCAGTGATTCAGTCTTCGGTGGGGGCTCAAATTATAGGTCATCATCATCGAGCAGGAGAGATTCCGAGGGTAAGGAGTCGCCACGGAAGGTTAATTTGGATGATTTGCCTCCATTTGAGAAGAATTTCTATGTTGAATCACCATCCATAGCAGCAATGACTGAAGGTGAGGTGGAAGAGTATAGACGACGACGGGAGATCACTATTGAGGGCCGTGATGTGCCCAAGCCTATAAAGTCCTTTCATGACGTAGGATTTCCAGATTATGTCTTGCAAGAAATCGAAAAAGCTGGCTTCACTGAACCTACACCTATTCAAGCTCAAGGTTGGCCTATGGCCTTGAAGGGTCGTGATCTCATTGGCATAGCAGAAACAGGGTCTGGGAAGACAATTGCTTATCTATTGCCTGCAATTGTGCACGTTAATGCCCAGCCCATTTTAGATCATGGAGATGGTCCAATTGTCTTAGTGTTAGCCCCAACTCGTGAACTTGCTGTTCAGATTCAACAAGAAGCTACTAAGTTTGGTGCATCATCGCGGATTAAGAATACCTGCATTTATGGTGGGGTTCCAAAGGGGCCCCAAGTTCGTGATCTTCAGAAAGGTGTTGAAATTGTTATTGCCACACCTGGAAGGTTGATTGATATGTTAGAATCTAATCATACAAATCTTCGAAGAGTGACATATCTCGTGCTGGATGAGGCTGACCGCATGCTAGACATGGGTTTTGAACCTCAGATCCGCAAAATTGTATCTCAGATACGCCCAGATCGTCAAACGCTGTATTGGAGTGCCACATGGCCTGACCTGAAAGCTAATCACGCTATTCGTCAGCATGTGGAAATCGTCTCGGAGAGCCAGAAGTATAATAAATTAGTAAAGTTGCTGGAAGATATTATGGATGGTAGTCGGATTTTAATATTCATGGACACTAAAAAGGGGTGTGACCAAGTAACTCGGCAGCTCCGGATGGATGGTTGGCCGGCACTTTCTATTCATGGTGATAAGAGTCAAGCAGAAAGAGATTGGGTCCTTTCAGAATTCAAAGCTGGAAAGTCTCCTATAATGACAGCTACAGACGTTGCTGCTCGAGGTCTAGATGTGAAGGATGTAAAGTTTGTAATCAACTATGATTTTCCTGGATCATTGGAGGACTATGTTCACCGAATTGGTAGAACGGGAAGAGCTGGTGCCTCAGGGACAGCATACACATTCTTTACTGCAGCGAATGCTAGGTTTGCGAAGGACCTTGTTAACATTCTTGAGGAGGCTGGACAGAAAGTCAGTCCTGAATTGGCAAAAATGGGACGTGGTGCTCCTCCCCCTCCTGGTCACGGAGGGTTTCGAGACCGTGGAAGGGGTTATGGAGGCAATAAGCAGTGGAGCTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g044860.1.1SL2.50ch12:37669366..37676235480+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g044860.1SL2.50ch12:37669367..376762356,869+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g044860.1.1.1SL2.50ch12:37669367..3766942256+n/a
exonexon:Solyc12g044860.1.1.10SL2.50ch12:37676177..3767623559+2
exonexon:Solyc12g044860.1.1.2SL2.50ch12:37670272..37670528257+1
exonexon:Solyc12g044860.1.1.3SL2.50ch12:37671413..37671592180+2
exonexon:Solyc12g044860.1.1.4SL2.50ch12:37671728..37671889162+2
exonexon:Solyc12g044860.1.1.5SL2.50ch12:37672033..37672187155+2
exonexon:Solyc12g044860.1.1.6SL2.50ch12:37672953..3767299543+n/a
exonexon:Solyc12g044860.1.1.7SL2.50ch12:37673262..3767333170+2
exonexon:Solyc12g044860.1.1.8SL2.50ch12:37673452..37673678227+1
exonexon:Solyc12g044860.1.1.9SL2.50ch12:37675697..37675927231+2
intronintron:Solyc12g044860.1.1.10SL2.50ch12:37675928..37676176n/a+n/a
intronintron:Solyc12g044860.1.1.2SL2.50ch12:37669423..37670271n/a+n/a
intronintron:Solyc12g044860.1.1.3SL2.50ch12:37670529..37671412n/a+n/a
intronintron:Solyc12g044860.1.1.4SL2.50ch12:37671593..37671727n/a+n/a
intronintron:Solyc12g044860.1.1.5SL2.50ch12:37671890..37672032n/a+n/a
intronintron:Solyc12g044860.1.1.6SL2.50ch12:37672188..37672952n/a+n/a
intronintron:Solyc12g044860.1.1.7SL2.50ch12:37672996..37673261n/a+n/a
intronintron:Solyc12g044860.1.1.8SL2.50ch12:37673332..37673451n/a+n/a
intronintron:Solyc12g044860.1.1.9SL2.50ch12:37673679..37675696n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F18005537%2Fdetails feature 18005537
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