Solanum lycopersicum gene Solyc12g088670.1

Gene  
Name
Solyc12g088670.1
Type
Gene
Organism
Solanum lycopersicum
Synonyms / aliases
Solyc12g088670
Length
3,772
  
Description
Cathepsin B-like cysteine proteinase (AHRD V1 **-- CYSP_SCHMA); contains Interpro domain(s) IPR013128 Peptidase C1A, papain IPR000169 Peptidase, cysteine peptidase active site IPR000668 Peptidase C1A, papain C-terminal
Location(s)
SL2.50ch12:63949590..63953361
GFF source
ITAG_eugene
From BOGAS
1
Length
3772
Genome Viewer  
Related features  
Features that are parts of this gene 
TypeNameLocationLengthStrandPhase
mRNASolyc12g088670.1.1SL2.50ch12:63949590..639533611,401-n/a
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Genomic sequence unprocessed genomic sequence region underlying this gene 
mRNA Solyc12g088670.1.1  
Ontology terms terms associated with this mRNA 
cDNA sequence spliced cDNA sequence, including UTRs 
Protein sequence translated polypeptide sequence 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g088670.1.1SL2.50ch12:63949589..63953361467-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g088670.1SL2.50ch12:63949590..639533613,772-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g088670.1.1.1SL2.50ch12:63952884..63953361478-n/a
exonexon:Solyc12g088670.1.1.2SL2.50ch12:63950653..63950888236-2
exonexon:Solyc12g088670.1.1.3SL2.50ch12:63950415..63950555141-n/a
exonexon:Solyc12g088670.1.1.4SL2.50ch12:63949772..63950221450-n/a
exonexon:Solyc12g088670.1.1.5SL2.50ch12:63949590..6394968596-n/a
intronintron:Solyc12g088670.1.1.2SL2.50ch12:63950889..63952883n/a-n/a
intronintron:Solyc12g088670.1.1.3SL2.50ch12:63950556..63950652n/a-n/a
intronintron:Solyc12g088670.1.1.4SL2.50ch12:63950222..63950414n/a-n/a
intronintron:Solyc12g088670.1.1.5SL2.50ch12:63949686..63949771n/a-n/a
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Related views  
Genetic loci
 http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F18010035%2Fdetails feature 18010035
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