Solanum lycopersicum mRNA Solyc12g088790.1.1
 mRNA details
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| Name | Type | Organism | |
|
Synonyms / aliases
mRNA:Solyc12g088790.1.1
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Length
366
|
|
Description
BHLH transcription factor-like (AHRD V1 ***- Q8S0N2_ORYSJ); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH
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|
Location(s)
SL2.50ch12:64023376..64024531
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005634
- GO:0045449
- Length
- 1156
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc12g088790.1.1 BHLH transcription factor-like (AHRD V1 ***- Q8S0N2_ORYSJ); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH
ATGGTGGCTATGAGGGAGATGATTTTTAGAATAGCTGCGATGCAACCAATTCAAATCGATCCATCATCTGTAAAAGCGCCCAAGAGAAGGAACGTGAAGATATCAAGCGATCCTCAAAGCGTGGCGGCGCGCCATAGGAGAGAAAGGATAAGTGAAAAGATAAGGATACTACAAAGATTAGTACCAGGTGGAACAAAAATGGACACTGCATCAATGTTAGATGAAGCAATTCATTACATGAAATTCTTGAAGAAGCAAGTTCAATCTCTTGAAAAAGTTGAAATTAATAGGCCTATGTCAATGTCATTAAGTGGGAATTACTTACCTAATTATAATTACCCTTATCATCAAAGTGTTCAACCCTAG
ATGGTGGCTATGAGGGAGATGATTTTTAGAATAGCTGCGATGCAACCAATTCAAATCGATCCATCATCTGTAAAAGCGCCCAAGAGAAGGAACGTGAAGATATCAAGCGATCCTCAAAGCGTGGCGGCGCGCCATAGGAGAGAAAGGATAAGTGAAAAGATAAGGATACTACAAAGATTAGTACCAGGTGGAACAAAAATGGACACTGCATCAATGTTAGATGAAGCAATTCATTACATGAAATTCTTGAAGAAGCAAGTTCAATCTCTTGAAAAAGTTGAAATTAATAGGCCTATGTCAATGTCATTAAGTGGGAATTACTTACCTAATTATAATTACCCTTATCATCAAAGTGTTCAACCCTAG
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc12g088790.1.1 | SL2.50ch12:64023375..64024531 | 122 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc12g088790.1 | SL2.50ch12:64023376..64024531 | 1,156 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc12g088790.1.1.1 | SL2.50ch12:64023376..64023445 | 70 | + | n/a |
| exon | exon:Solyc12g088790.1.1.2 | SL2.50ch12:64024236..64024531 | 296 | + | 2 |
| intron | intron:Solyc12g088790.1.1.1 | SL2.50ch12:64023446..64024235 | n/a | + | n/a |
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| User comments |
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