Solanum lycopersicum mRNA Solyc12g089380.1.1

mRNA details  
Name
Solyc12g089380.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g089380.1.1
Length
774
  
Description
Expansin (AHRD V1 ***- Q9FVH0_SOLLC); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminal
Location(s)
SL2.50ch12:64492348..64494346
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005576
  • GO:0009664
Length
1999
Nb exon
3
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g089380.1.1 Expansin (AHRD V1 ***- Q9FVH0_SOLLC); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminal

ATGGCAAATAATGTCAATTTAGCATTGGGATTTATAATTGGTTTGTGTACATTTTTCTCCAGTGCAAATGGTTTCTCAGCAGATTCTGGATGGACAAGTGCTCATGCCACATTTTATGGTGGAGCTGATGCTTCTGGCACAATGGGAGGTGCTTGTGGATATGGTAATTTGTATTCAACAGGATATGGTACTAGAACAGCAGCATTGAGTACAGCATTGTTCAATGATGGAGGATCATGTGGTCAATGTTACAAAATAATTTGTGATTACAAATTAGATCCTCAATGGTGCAAAAAGGGAGTATCAGTTACAATTACATCTACAAATTTTTGTCCACCAAATTATAATCTTCCTAGTAACAATGGAGGATGGTGCAACCCTCCACGTCCACATTTTGATATGGCTCAACCAGCTTGGGAAAAAATTGGCATTTACAAAGGTGGCATTGTTCCTGTTTTATACAAAAGGGTACCTTGCAAGAAGCATGGTGGAGTTAGATTCACAATAAATGGAAGAGACTATTTTGAACTAGTGTTGGTAAGCAATGTAGGAGGGGCAGGATCTGTTGAATCAGTTCAAATCAAAGGCTCAAACACAAATTGGCTAACAATGTCAAGAAATTGGGGAGCAAGTTGGCAATCAAATGCATATCTTGATGGACAATCAATATCATTCAAAGTTACTACTAGTGATGGTGTCACAAAAACATTCTTAAATATTGTTCCATCTAGTTGGAAATTTGGCCAAACATTTTCAAGCAAAACTCAATTCTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g089380.1.1SL2.50ch12:64492347..64494346258-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g089380.1SL2.50ch12:64492348..644943461,999-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g089380.1.1.1SL2.50ch12:64494202..64494346145-n/a
exonexon:Solyc12g089380.1.1.2SL2.50ch12:64493300..64493621322-2
exonexon:Solyc12g089380.1.1.3SL2.50ch12:64492348..64492654307-1
intronintron:Solyc12g089380.1.1.2SL2.50ch12:64493622..64494201n/a-n/a
intronintron:Solyc12g089380.1.1.3SL2.50ch12:64492655..64493299n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F18010829%2Fdetails feature 18010829
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)