Solanum lycopersicum mRNA Solyc12g098620.1.1

mRNA details  
Name
Solyc12g098620.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc12g098620.1.1
Length
1,215
  
Description
Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch12:66065713..66068316
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2604
Nb exon
8
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc12g098620.1.1 Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGGAGAAGAAAAATTTGTTCTTGAACAATGTCAACACAATGAATGAGTTGAATTGTACTAGTACTAGTTTTTACAATCCCAATTGGGAGAATTCTTCAATGGATTATCAAAATGACAATATTTTGTCTAGTAATAGTAACAATTTTGGTGAAATTTCACCAAATTCTTTTGTTGGTAGTAATAACAATTCTTGTTATACTACTCCATTGAATTCTCCTCCAAGACTCAATCTTTCCAACTTTGATCATCAAATCAAGGGAAATTTTCCAAATACTAGTAATAATTTGCCACATTTTTCTACTAATCTTGGAAATTTTTCTTGTTTTGGTGGCAATGATTCACAATTTGTCCAAAATTTGGAAAGTTGTAAACTTTCAAGAAACAAGTCTATGAAAGAAAGTGAATTTGGAGATTCAAGAGAGAATTCTTCAATTTCTCAACAAATTCAACTTGAAGAAGTTGGAATCAAATGTCAAAATGATGCAAATTCCAAGAAAGGGAAATCAATTCCAAAGAGGAAAGCTAAAGAAATCACTCCCAAGAATGATAATGTTTCAACACAAAACAATGAATCAAGTTCAAAAAGAGTCAAATCTGATGAAAAAAATGAAGAAAATCAAAAGCCTCAAGATTCATTAAAGGATTATATTCATGTTAGAGCTAGAAGGGGTCAAGCCACAGATGCACATAGTCTAGCTGAAAGGGTGAGAAGAGAAAAAATTGGTGAAAGAATGAAGTTTTTACAAGATCTTGTACCTGGCTGCAATAAAGTGACTGGAAAAGCTGTGATGCTTGATGAGATTATTAACTATGTACAATCCCTACAATGTCAAGTTGAGTTCCTCTCGATGAAGTTATCTAATCTGAATTCAACAACTGACTTCAACGCGGAATCTCTTACGTCTAAGAATATGTTTCAATCCGTCGGATCGTTGCATCATAACATGAATTCATCAGAATCCTCAGTACAAGAATTTCCATATGGATTTCAATCTCAACAAGGGTCAAATATACAAAGTTTCTTAACTAAAGAAACAGAATTTCCCTTTAAGATTAATCCTCATTTGGATGGTTTTGTGGAGCAAACACCTCAGGTTCCAACATTCTTTGAAGATCATGATCTTCATAGTTTTATCCATATGGGGTTTAGCCAAATTCAAGCACAAAACTATCCTGGCAATGTCTCCACAGCACAAATGAAGGCTGAACTATGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc12g098620.1.1SL2.50ch12:66065712..66068316405+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc12g098620.1SL2.50ch12:66065713..660683162,604+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc12g098620.1.1.1SL2.50ch12:66065713..66066264552+n/a
exonexon:Solyc12g098620.1.1.2SL2.50ch12:66066625..66066777153+n/a
exonexon:Solyc12g098620.1.1.3SL2.50ch12:66066901..6606696666+n/a
exonexon:Solyc12g098620.1.1.4SL2.50ch12:66067080..6606714869+n/a
exonexon:Solyc12g098620.1.1.5SL2.50ch12:66067266..6606733772+n/a
exonexon:Solyc12g098620.1.1.6SL2.50ch12:66067504..66067686183+n/a
exonexon:Solyc12g098620.1.1.7SL2.50ch12:66067909..6606799082+n/a
exonexon:Solyc12g098620.1.1.8SL2.50ch12:66068279..6606831638+2
intronintron:Solyc12g098620.1.1.1SL2.50ch12:66066265..66066624n/a+n/a
intronintron:Solyc12g098620.1.1.2SL2.50ch12:66066778..66066900n/a+n/a
intronintron:Solyc12g098620.1.1.3SL2.50ch12:66066967..66067079n/a+n/a
intronintron:Solyc12g098620.1.1.4SL2.50ch12:66067149..66067265n/a+n/a
intronintron:Solyc12g098620.1.1.5SL2.50ch12:66067338..66067503n/a+n/a
intronintron:Solyc12g098620.1.1.6SL2.50ch12:66067687..66067908n/a+n/a
intronintron:Solyc12g098620.1.1.7SL2.50ch12:66067991..66068278n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F18013346%2Fdetails feature 18013346
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