Solanum lycopersicum polypeptide Solyc10g005130.2.1
 Polypeptide details
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| Name | Type |
Length
1,889
|
Organism |
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Description
polypeptide feature inferred from GFF3 feature
|
|
Location(s)
SL2.50ch10:112142..125039
|
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GFF source
ITAG_eugene
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| Polypeptide sequence
| translated polypeptide sequence |
>Solyc10g005130.2.1 Ribonuclease 3-like protein 3 (AHRD V1 *-*- RTL3_ORYSJ); contains Interpro domain(s) IPR005034 Dicer double-stranded RNA-binding fold
MDGDGSGVSEKPSYWIDAYEDISCDDLIQDFVGSNTVPVAPLNQLGPDETLDPCFFGGIDGILEKLKNGDGSVHSVDGNNSNVHTEALAAPGICKDNGPQVKKDVDHNKGDLGKKSLQEGNGFSRHKERGCSDKEEKNGKRARLGDDSYQRRGCDRPLARKRLRENDEINRVGRDQRKRREYHGGRGGRDRNWREGSGFWEWDKEKKEMIYRVGSWEADRNREGKLPTERSREPSGAIEKKDDKLKEQAPKEEARKYQLDVLEHARKSNTIAFLETGAGKTLIAILLMKSLCSDLQKKNKKMLAVFLVPKVPLVYQQAEVIREQTGYQVGHYCGEMGQDFWDARRWQREFETKQVLVMTAQILLNILRHSIIKMEAINLLIMDECHHAVKKHPYSLVMSEFYHTTQKEKRPSVFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSVVFTIKDRKELEKHVPMPSEVVVEYDKAASLWSFHEQIKKMESEVEEAALLSSRRSKWQFMGACDAGARGELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAHSFLTALQNDERASYQLDVKFQESYLDKVVSLLQCQLSEGAVAQSNLNAETHKGDNPNSDRPDEMEEGELLESHVVSVGEHVDVILGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVTALVLPKVFEELPSLSFINSSSLIGHNNSQEMRTGQMQDTIAKFRDGRINLLVATSVAEEGLDIRQCNVVIRFDLAKTILAYIQSRGRARKPGSDYILMVERDNSSHEAFLRNARNSEETLRKEAIERTDISHLKDASKLISAEAPTDSVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMESHEKSGCPTEYSCRLQLPCNAPFETLDGPVCSSMRLAQQAACLDACKKLHQMGAFTDMLLPDKGSGVESEKVEQDEEGDPIPGTSRHREFYPEGVADILRGDWILSGKDPLVSSKFIHLYMYAIKCVNIGPSKDPFLTDVSEFAILFGNELDAEVLSMSMDLFIARTVVTKATLVFRGPIDVTEFQLASLKSFHVRMMSIVLDVDVEPSTTPWDPAKAYLFAPVSGDESGDPIKDINWDHIKKITETGVWSNPLQRARPDVYLGTNERSLGGDRREYGFAKLRHGMAIGLKSHPTYGVRGAIAHYDLVQASGLVPNRSSLDDVEVDLNKDKIMMADCSLRAEDIVGRIVTAAHSGKRFYVDCIRSDMTAENSFPRKEGYLGPLEYSSYAAYYKQKYGVDLVYKKQPLIRGRGVSYCKNLLSPRFEHSEEHEGELEEATDKTYYVFLPPELCVLHPLPGSLVRGAQRLPSIMRRIESMLLAVQLKEMIGYPVPALKILEALTAASCQETFCYERAELLGDAYLKWVVSRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQNALSKGIQSYIQADRFSPSRWAAPGVLPVYDEDLNEDETSIFDHETAENGTVAAKALAGDEFEDEETEEGVYYVEGGKYAANHFMKWIGVEVDFDFNFKETEYSIRSCSIPENVLKSVEFDALQGALNISFNDKGLLLEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHSLHLHLRHGSSALEKQIRDFVNEVKNELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGCNTKSVWEVFQPLLHPMVTPETLPMHPVRELQERCQQQAQGLEYKATRSGNMATVEVYVDGVQVGMAQNPQKKMAQKLAARNALVVLKEREEAEAKKADDTKKKKNGNPSFTRQTLNDICLRKNWPMPLYRCVHEGGPAHAKRFTYGVRVNISDKGFTDECIGEPMPSVKKAKDSAAALLLELLNRRYS*
MDGDGSGVSEKPSYWIDAYEDISCDDLIQDFVGSNTVPVAPLNQLGPDETLDPCFFGGIDGILEKLKNGDGSVHSVDGNNSNVHTEALAAPGICKDNGPQVKKDVDHNKGDLGKKSLQEGNGFSRHKERGCSDKEEKNGKRARLGDDSYQRRGCDRPLARKRLRENDEINRVGRDQRKRREYHGGRGGRDRNWREGSGFWEWDKEKKEMIYRVGSWEADRNREGKLPTERSREPSGAIEKKDDKLKEQAPKEEARKYQLDVLEHARKSNTIAFLETGAGKTLIAILLMKSLCSDLQKKNKKMLAVFLVPKVPLVYQQAEVIREQTGYQVGHYCGEMGQDFWDARRWQREFETKQVLVMTAQILLNILRHSIIKMEAINLLIMDECHHAVKKHPYSLVMSEFYHTTQKEKRPSVFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSVVFTIKDRKELEKHVPMPSEVVVEYDKAASLWSFHEQIKKMESEVEEAALLSSRRSKWQFMGACDAGARGELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAHSFLTALQNDERASYQLDVKFQESYLDKVVSLLQCQLSEGAVAQSNLNAETHKGDNPNSDRPDEMEEGELLESHVVSVGEHVDVILGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVTALVLPKVFEELPSLSFINSSSLIGHNNSQEMRTGQMQDTIAKFRDGRINLLVATSVAEEGLDIRQCNVVIRFDLAKTILAYIQSRGRARKPGSDYILMVERDNSSHEAFLRNARNSEETLRKEAIERTDISHLKDASKLISAEAPTDSVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMESHEKSGCPTEYSCRLQLPCNAPFETLDGPVCSSMRLAQQAACLDACKKLHQMGAFTDMLLPDKGSGVESEKVEQDEEGDPIPGTSRHREFYPEGVADILRGDWILSGKDPLVSSKFIHLYMYAIKCVNIGPSKDPFLTDVSEFAILFGNELDAEVLSMSMDLFIARTVVTKATLVFRGPIDVTEFQLASLKSFHVRMMSIVLDVDVEPSTTPWDPAKAYLFAPVSGDESGDPIKDINWDHIKKITETGVWSNPLQRARPDVYLGTNERSLGGDRREYGFAKLRHGMAIGLKSHPTYGVRGAIAHYDLVQASGLVPNRSSLDDVEVDLNKDKIMMADCSLRAEDIVGRIVTAAHSGKRFYVDCIRSDMTAENSFPRKEGYLGPLEYSSYAAYYKQKYGVDLVYKKQPLIRGRGVSYCKNLLSPRFEHSEEHEGELEEATDKTYYVFLPPELCVLHPLPGSLVRGAQRLPSIMRRIESMLLAVQLKEMIGYPVPALKILEALTAASCQETFCYERAELLGDAYLKWVVSRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQNALSKGIQSYIQADRFSPSRWAAPGVLPVYDEDLNEDETSIFDHETAENGTVAAKALAGDEFEDEETEEGVYYVEGGKYAANHFMKWIGVEVDFDFNFKETEYSIRSCSIPENVLKSVEFDALQGALNISFNDKGLLLEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHSLHLHLRHGSSALEKQIRDFVNEVKNELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGCNTKSVWEVFQPLLHPMVTPETLPMHPVRELQERCQQQAQGLEYKATRSGNMATVEVYVDGVQVGMAQNPQKKMAQKLAARNALVVLKEREEAEAKKADDTKKKKNGNPSFTRQTLNDICLRKNWPMPLYRCVHEGGPAHAKRFTYGVRVNISDKGFTDECIGEPMPSVKKAKDSAAALLLELLNRRYS*
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this polypeptide |
| Related features
|
| Features this polypeptide derives from |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| mRNA | Solyc10g005130.2.1 | SL2.50ch10:111879..125251 | 6,054 | + | n/a |
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