Arabidopsis thaliana gene AT4G39540
 Gene
|
| Name | Type |
Length
2,193
|
Organism |
|
Description
shikimate kinase 2
shikimate kinase 2 shikimate kinase 2 |
|
Location(s)
TAIR10ch04:18378225..18380417
|
|
GFF source
TAIR10
|
| Genome Viewer
|
| Related features
|
| Features that are parts of this gene |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| mRNA | AT4G39540.1 | TAIR10ch04:18378334..18380417 | 1,294 | + | n/a |
| mRNA | AT4G39540.2 | TAIR10ch04:18378233..18380411 | 1,154 | + | n/a |
| mRNA | AT4G39540.3 | TAIR10ch04:18378225..18380417 | 1,192 | + | n/a |
Add items to a list:
 Genomic sequence
| unprocessed genomic sequence region underlying this gene |
| mRNA AT4G39540.1
|
| Ontology terms | terms associated with this mRNA |
|
cDNA sequence
| spliced cDNA sequence, including UTRs |
|
Protein sequence
| translated polypeptide sequence |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | AT4G39540.1 | TAIR10ch04:18378561..18380253 | 300 | + | n/a |
Add items to a list:
| Features this mRNA is a part of |
Add items to a list:
| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon-auto18302770 | TAIR10ch04:18378334..18378756 | 423 | + | n/a |
| exon | exon-auto18302771 | TAIR10ch04:18378856..18378917 | 62 | + | n/a |
| exon | exon-auto18302772 | TAIR10ch04:18379039..18379093 | 55 | + | n/a |
| exon | exon-auto18302773 | TAIR10ch04:18379183..18379255 | 73 | + | n/a |
| exon | exon-auto18302774 | TAIR10ch04:18379334..18379421 | 88 | + | n/a |
| exon | exon-auto18302775 | TAIR10ch04:18379497..18379582 | 86 | + | n/a |
| exon | exon-auto18302776 | TAIR10ch04:18379659..18379791 | 133 | + | n/a |
| exon | exon-auto18302777 | TAIR10ch04:18379868..18379946 | 79 | + | n/a |
| exon | exon-auto18302778 | TAIR10ch04:18380033..18380097 | 65 | + | n/a |
| exon | exon-auto18302779 | TAIR10ch04:18380188..18380417 | 230 | + | n/a |
Add items to a list:
| mRNA AT4G39540.2
|
| Ontology terms | terms associated with this mRNA |
|
cDNA sequence
| spliced cDNA sequence, including UTRs |
|
Protein sequence
| translated polypeptide sequence |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | AT4G39540.2 | TAIR10ch04:18378561..18380253 | 300 | + | n/a |
Add items to a list:
| Features this mRNA is a part of |
Add items to a list:
| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon-auto18302782 | TAIR10ch04:18378233..18378322 | 90 | + | n/a |
| exon | exon-auto18302783 | TAIR10ch04:18378558..18378756 | 199 | + | n/a |
| exon | exon-auto18302784 | TAIR10ch04:18378856..18378917 | 62 | + | n/a |
| exon | exon-auto18302785 | TAIR10ch04:18379039..18379093 | 55 | + | n/a |
| exon | exon-auto18302786 | TAIR10ch04:18379183..18379255 | 73 | + | n/a |
| exon | exon-auto18302787 | TAIR10ch04:18379334..18379421 | 88 | + | n/a |
| exon | exon-auto18302788 | TAIR10ch04:18379497..18379582 | 86 | + | n/a |
| exon | exon-auto18302789 | TAIR10ch04:18379659..18379791 | 133 | + | n/a |
| exon | exon-auto18302790 | TAIR10ch04:18379868..18379946 | 79 | + | n/a |
| exon | exon-auto18302791 | TAIR10ch04:18380033..18380097 | 65 | + | n/a |
| exon | exon-auto18302792 | TAIR10ch04:18380188..18380411 | 224 | + | n/a |
Add items to a list:
| mRNA AT4G39540.3
|
| Ontology terms | terms associated with this mRNA |
|
cDNA sequence
| spliced cDNA sequence, including UTRs |
|
Protein sequence
| translated polypeptide sequence |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | AT4G39540.3 | TAIR10ch04:18378561..18380253 | 308 | + | n/a |
Add items to a list:
| Features this mRNA is a part of |
Add items to a list:
| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon-auto18302795 | TAIR10ch04:18378225..18378322 | 98 | + | n/a |
| exon | exon-auto18302796 | TAIR10ch04:18378558..18378756 | 199 | + | n/a |
| exon | exon-auto18302797 | TAIR10ch04:18378856..18378917 | 62 | + | n/a |
| exon | exon-auto18302798 | TAIR10ch04:18379039..18379089 | 51 | + | n/a |
| exon | exon-auto18302799 | TAIR10ch04:18379155..18379255 | 101 | + | n/a |
| exon | exon-auto18302800 | TAIR10ch04:18379334..18379421 | 88 | + | n/a |
| exon | exon-auto18302801 | TAIR10ch04:18379497..18379582 | 86 | + | n/a |
| exon | exon-auto18302802 | TAIR10ch04:18379659..18379791 | 133 | + | n/a |
| exon | exon-auto18302803 | TAIR10ch04:18379868..18379946 | 79 | + | n/a |
| exon | exon-auto18302804 | TAIR10ch04:18380033..18380097 | 65 | + | n/a |
| exon | exon-auto18302805 | TAIR10ch04:18380188..18380417 | 230 | + | n/a |
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| Related views
|
- Genetic loci
| User comments |
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