Oryza sativa mRNA Os01t0911700-01
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Name |
Synonyms / aliases
AK073805, ABI3, OsVP1, Vp1
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Type | Organism |
Description
Similar to Regulatory protein viviparous-1.
|
Location(s)
IRGSP_chr01build05r1:41452868..41456666
|
Ontology term(s) |
GFF source
IRGSP_build5_rep
|
InterPro | KEGG |
- Expression
- AK073805
- Nias flcdna
- J033069I02
- Orf evidence
- P26307 (UniProt)
- Transcript evidence
- AK073805 (DDBJ, Best hit)
![]() | spliced mRNA sequence, including UTRs |
>Os01t0911700-01 Similar to Regulatory protein viviparous-1.
CTCAGTAACTGCACCCACCTCCACACCTACACGCACACAGACAAACAAAGCCAAACCCCCCGCCTCGCCTACATCTCGCGCTCTCCGCCCCCCGCCCGCCTCCACTCTGCATGGACGCCTCCGCCGGCTCGTCGGCCCCGGCGGCGGAGATCAGGGGTGAGGCGGCGAGGGATGACGTCTTTTTCGCTGACGATACCTTCCCGTTGCTCCCGGACTTCCCGTGCCTTTCTTCCCCGTCAAGCTCAACCTTCTCGTCGTCGTCGTCGTCGAACTCGTCCAGCGCTTTCACCACCGCGGCGGGAGGGGGTTGCGGCGGTGAGCCGTCCGAGCCGGCCTCGGCGGCGGACGGGTTTGGTGAGCTCGCCGACATAGACCAGCTCCTCGACCTCGCGTCGCTGTCCGTCCCGTGGGAGGCCGAGCAGCCGCTGTTCCCGGACGACGTTGGCATGATGATAGAGGACGCCATGTCCGGGCAACCGCATCAGGCGGACGACTGTACCGGCGACGGCGATACGAAGGCGGTGATGGAGGCGGCCGGGGGAGGAGACGACGCCGGCGACGCATGCATGGAGGGGAGTGATGCGCCCGACGATCTGCCGGCGTTCTTCATGGAGTGGCTCACGAGCAACCGTGAGTACATCTCCGCCGACGACCTCCGCAGCATCCGCCTCCGCCGATCCACCATCGAGGCGGCGGCCGCGCGGCTCGGCGGCGGGCGCCAGGGCACCATGCAGCTGCTCAAGCTCATCCTCACCTGGGTGCAGAACCACCACCTCCAGAAGAAGCGCCCCCGCACGGCGATTGACGACGGCGCCGCGTCGTCGGACCCTCAGCTCCCCAGCCCCGGCGCAAACCCCGGCTACGAGTTCCCCTCCGGTGGCCAGGAGATGGGCTCCGCCGCCGCCACATCCTGGATGCCCTACCAGGCCTTCACGCCGCCAGCCGCGTACGGCGGCGACGCCATGTACCCAGGCGCCGCCGGCCCGTTCCCTTTCCAGCAGAGCTGCAGCAAGAGCAGCGTGGTCGTGAGCAGCCAGCCGTTCTCCCCGCCGACCGCGGCGGCGGCGGGCGACATGCATGCGTCGGGCGGAGGGAACATGGCCTGGCCGCAGCAATTCGCGCCGTTCCCCGTCTCCTCCACGAGCTCCTACACCATGCCGTCGGTCGTGCCACCGCCGTTCACCGCCGGATTCCCCGGGCAGTACTCCGGCGGCCACGCCATGTGCTCTCCACGCCTCGCCGGAGTCGAGCCGTCCTCGACAAAGGAGGCCCGGAAGAAGCGGATGGCGAGGCAGCGCCGCCTCTCCTGCCTGCAGCAGCAACGTAGCCAGCAGCTCAACCTGAGCCAGATCCACATCTCCGGCCATCCACAGGAGCCCTCCCCTCGCGCCGCGCACTCGGCGCCGGTCACCCCGTCGTCGGCCGGCTGCCGGAGCTGGGGCATCTGGCCGCCGGCGGCCCAGATCATCCAGAATCCCCTATCAAACAAGCCCAATCCTCCTCCCGCCACGTCGAAGCAGCCGAAACCCTCGCCGGAGAAACCGAAGCCGAAGCCGCAGGCGGCGGCGACGGCCGGAGCGGAGAGCCTTCAGCGCTCGACGGCTTCAGAGAAGCGGCAGGCGAAGACGGACAAGAACCTGCGGTTCCTGCTGCAGAAGGTGCTGAAGCAGAGCGACGTCGGGAGCCTCGGCCGCATCGTGCTCCCCAAAGAAGCAGAGGTTCACCTGCCGGAGCTGAAGACGAGGGATGGTGTCTCCATCCCCATGGAAGACATCGGGACGTCTCAGGTGTGGAACATGCGGTACCGGTTTTGGCCCAACAACAAAAGCAGGATGTATCTTCTCGAAAACACAGGTGATTTTGTTCGTTCAAACGAGCTGCAGGAGGGTGATTTCATTGTGATCTACTCCGATATCAAGTCAGGCAAATATCTGATACGTGGTGTGAAGGTGAGGCGCGCGGCGCAGGAGCAAGGCAACTCGTCGGGGGCGGTAGGTAAGCATAAGCATGGCTCGCCGGAGAAACCCGGCGTCTCGTCCAATACAAAGGCCGCCGGCGCCGAGGACGGCACCGGCGGCGATGACAGTGCCGAAGCCGCAGCGGCGGCGGCGGCAGGCAAGGCTGACGGCGGCGGCTGCAAGGGCAAGTCCCCGCACGGCGTGCGGCGTTCTCGCCAGGAGGCCGCCGCCGCCGCCTCCATGAGCCAGATGGCGGTTAGCATCTGAAGAAACAGATGACAGCAGCAGCAGCAAGCTTCAGTCCATTTGAAGGTTAATTATTAGCTAGCTAGCTCCGTATTATAACCGATGGTAAAACCTCCTAAAAAAATTAATTAAGTTGTGCATGTGAATCGTAGCGCTAGCTAGGGATGATATTTGATCAGTAACCCGTAGTCCCCGTACCAGTGACGCTTAAGTACGCATGGTTTGGTTGTTCATCGTTGAACCCCTGTAGTGTGTCGTCGTCCTGTACATGCATCGAATTATGGAATTAATTAATTACC
CTCAGTAACTGCACCCACCTCCACACCTACACGCACACAGACAAACAAAGCCAAACCCCCCGCCTCGCCTACATCTCGCGCTCTCCGCCCCCCGCCCGCCTCCACTCTGCATGGACGCCTCCGCCGGCTCGTCGGCCCCGGCGGCGGAGATCAGGGGTGAGGCGGCGAGGGATGACGTCTTTTTCGCTGACGATACCTTCCCGTTGCTCCCGGACTTCCCGTGCCTTTCTTCCCCGTCAAGCTCAACCTTCTCGTCGTCGTCGTCGTCGAACTCGTCCAGCGCTTTCACCACCGCGGCGGGAGGGGGTTGCGGCGGTGAGCCGTCCGAGCCGGCCTCGGCGGCGGACGGGTTTGGTGAGCTCGCCGACATAGACCAGCTCCTCGACCTCGCGTCGCTGTCCGTCCCGTGGGAGGCCGAGCAGCCGCTGTTCCCGGACGACGTTGGCATGATGATAGAGGACGCCATGTCCGGGCAACCGCATCAGGCGGACGACTGTACCGGCGACGGCGATACGAAGGCGGTGATGGAGGCGGCCGGGGGAGGAGACGACGCCGGCGACGCATGCATGGAGGGGAGTGATGCGCCCGACGATCTGCCGGCGTTCTTCATGGAGTGGCTCACGAGCAACCGTGAGTACATCTCCGCCGACGACCTCCGCAGCATCCGCCTCCGCCGATCCACCATCGAGGCGGCGGCCGCGCGGCTCGGCGGCGGGCGCCAGGGCACCATGCAGCTGCTCAAGCTCATCCTCACCTGGGTGCAGAACCACCACCTCCAGAAGAAGCGCCCCCGCACGGCGATTGACGACGGCGCCGCGTCGTCGGACCCTCAGCTCCCCAGCCCCGGCGCAAACCCCGGCTACGAGTTCCCCTCCGGTGGCCAGGAGATGGGCTCCGCCGCCGCCACATCCTGGATGCCCTACCAGGCCTTCACGCCGCCAGCCGCGTACGGCGGCGACGCCATGTACCCAGGCGCCGCCGGCCCGTTCCCTTTCCAGCAGAGCTGCAGCAAGAGCAGCGTGGTCGTGAGCAGCCAGCCGTTCTCCCCGCCGACCGCGGCGGCGGCGGGCGACATGCATGCGTCGGGCGGAGGGAACATGGCCTGGCCGCAGCAATTCGCGCCGTTCCCCGTCTCCTCCACGAGCTCCTACACCATGCCGTCGGTCGTGCCACCGCCGTTCACCGCCGGATTCCCCGGGCAGTACTCCGGCGGCCACGCCATGTGCTCTCCACGCCTCGCCGGAGTCGAGCCGTCCTCGACAAAGGAGGCCCGGAAGAAGCGGATGGCGAGGCAGCGCCGCCTCTCCTGCCTGCAGCAGCAACGTAGCCAGCAGCTCAACCTGAGCCAGATCCACATCTCCGGCCATCCACAGGAGCCCTCCCCTCGCGCCGCGCACTCGGCGCCGGTCACCCCGTCGTCGGCCGGCTGCCGGAGCTGGGGCATCTGGCCGCCGGCGGCCCAGATCATCCAGAATCCCCTATCAAACAAGCCCAATCCTCCTCCCGCCACGTCGAAGCAGCCGAAACCCTCGCCGGAGAAACCGAAGCCGAAGCCGCAGGCGGCGGCGACGGCCGGAGCGGAGAGCCTTCAGCGCTCGACGGCTTCAGAGAAGCGGCAGGCGAAGACGGACAAGAACCTGCGGTTCCTGCTGCAGAAGGTGCTGAAGCAGAGCGACGTCGGGAGCCTCGGCCGCATCGTGCTCCCCAAAGAAGCAGAGGTTCACCTGCCGGAGCTGAAGACGAGGGATGGTGTCTCCATCCCCATGGAAGACATCGGGACGTCTCAGGTGTGGAACATGCGGTACCGGTTTTGGCCCAACAACAAAAGCAGGATGTATCTTCTCGAAAACACAGGTGATTTTGTTCGTTCAAACGAGCTGCAGGAGGGTGATTTCATTGTGATCTACTCCGATATCAAGTCAGGCAAATATCTGATACGTGGTGTGAAGGTGAGGCGCGCGGCGCAGGAGCAAGGCAACTCGTCGGGGGCGGTAGGTAAGCATAAGCATGGCTCGCCGGAGAAACCCGGCGTCTCGTCCAATACAAAGGCCGCCGGCGCCGAGGACGGCACCGGCGGCGATGACAGTGCCGAAGCCGCAGCGGCGGCGGCGGCAGGCAAGGCTGACGGCGGCGGCTGCAAGGGCAAGTCCCCGCACGGCGTGCGGCGTTCTCGCCAGGAGGCCGCCGCCGCCGCCTCCATGAGCCAGATGGCGGTTAGCATCTGAAGAAACAGATGACAGCAGCAGCAGCAAGCTTCAGTCCATTTGAAGGTTAATTATTAGCTAGCTAGCTCCGTATTATAACCGATGGTAAAACCTCCTAAAAAAATTAATTAAGTTGTGCATGTGAATCGTAGCGCTAGCTAGGGATGATATTTGATCAGTAACCCGTAGTCCCCGTACCAGTGACGCTTAAGTACGCATGGTTTGGTTGTTCATCGTTGAACCCCTGTAGTGTGTCGTCGTCCTGTACATGCATCGAATTATGGAATTAATTAATTACC
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Os01t0911700-01 | IRGSP_chr01build05r1:41453146..41456556 | n/a | - | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Os01g0911700 | IRGSP_chr01build05r1:41452853..41456666 | 3,814 | - | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon-auto19028416 | IRGSP_chr01build05r1:41452868..41453439 | 572 | - | n/a |
exon | exon-auto19028418 | IRGSP_chr01build05r1:41453679..41453755 | 77 | - | n/a |
exon | exon-auto19028420 | IRGSP_chr01build05r1:41453875..41453921 | 47 | - | n/a |
exon | exon-auto19028422 | IRGSP_chr01build05r1:41454376..41454473 | 98 | - | n/a |
exon | exon-auto19028424 | IRGSP_chr01build05r1:41454694..41454783 | 90 | - | n/a |
exon | exon-auto19028426 | IRGSP_chr01build05r1:41454979..41456461 | 1,483 | - | n/a |
exon | exon-auto19028428 | IRGSP_chr01build05r1:41456531..41456666 | 136 | - | n/a |
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