Oryza sativa gene Os03g0309200
 Gene
|
| Name | Type |
Length
8,034
|
Organism |
|
Description
Similar to Phytochrome B.
Similar to Phytochrome B. |
|
Location(s)
IRGSP_chr03build05r1:11068150..11076183
|
|
GFF source
IRGSP_build5_locus
|
- Transcript variants
- Os03t0309200-01
- Os03t0309200-02
| Genome Viewer
|
| Related features
|
| Features that are parts of this gene |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| mRNA | Os03t0309200-01 | IRGSP_chr03build05r1:11068150..11076139 | n/a | + | n/a |
| mRNA | Os03t0309200-02 | IRGSP_chr03build05r1:11075472..11076183 | n/a | + | n/a |
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 Genomic sequence
| unprocessed genomic sequence region underlying this gene |
| mRNA Os03t0309200-01
|
| Ontology terms
| terms associated with this mRNA |
- GO:0005524 – ATP binding
- GO:0004871 – signal transducer activity
- GO:0007165 – signal transduction
- GO:0000155 – phosphorelay sensor kinase activity
- GO:0016020 – membrane
- GO:0007600 – sensory perception
- GO:0008020 – G-protein coupled photoreceptor activity
- GO:0018298 – obsolete protein-chromophore linkage (obsolete GO:0018298)
- GO:0045449 – regulation of transcription (obsolete GO:regulation of transcription)
- GO:0004872 – receptor activity
- GO:0006355 – regulation of DNA-templated transcription
- GO:0009585 – red, far-red light phototransduction
- GO:0009881 – photoreceptor activity
- GO:0017006 – protein-tetrapyrrole linkage
- GO:0042803 – protein homodimerization activity
- GO:0004673 – protein histidine kinase activity
- GO:0018106 – peptidyl-histidine phosphorylation
|
cDNA sequence
| spliced cDNA sequence, including UTRs |
|
Protein sequence
| translated polypeptide sequence |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Os03t0309200-01 | IRGSP_chr03build05r1:11068262..11075697 | n/a | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Os03g0309200 | IRGSP_chr03build05r1:11068150..11076183 | 8,034 | + | n/a |
Add items to a list:
| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon-auto18877412 | IRGSP_chr03build05r1:11068150..11068295 | 146 | + | n/a |
| exon | exon-auto18877413 | IRGSP_chr03build05r1:11068517..11070520 | 2,004 | + | n/a |
| exon | exon-auto18877414 | IRGSP_chr03build05r1:11070919..11071726 | 808 | + | n/a |
| exon | exon-auto18877415 | IRGSP_chr03build05r1:11072844..11073137 | 294 | + | n/a |
| exon | exon-auto18877417 | IRGSP_chr03build05r1:11075475..11076139 | 665 | + | n/a |
Add items to a list:
| mRNA Os03t0309200-02
|
| Ontology terms
| terms associated with this mRNA |
|
cDNA sequence
| spliced cDNA sequence, including UTRs |
|
Protein sequence
| translated polypeptide sequence |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Os03t0309200-02 | IRGSP_chr03build05r1:11075473..11075697 | n/a | + | n/a |
Add items to a list:
| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Os03g0309200 | IRGSP_chr03build05r1:11068150..11076183 | 8,034 | + | n/a |
Add items to a list:
| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon-auto18877416 | IRGSP_chr03build05r1:11075472..11076139 | 668 | + | n/a |
| exon | exon-auto18877418 | IRGSP_chr03build05r1:11075698..11076183 | 486 | + | n/a |
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| Related views
|
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