Oryza sativa mRNA Os05t0491100-01
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Name | Synonyms / aliases | Type | Organism |
Description
Similar to Calmodulin.
|
Location(s)
IRGSP_chr05build05r1:24229589..24231905
|
Ontology term(s) |
InterPro | KEGG |
GFF source
IRGSP_build5_rep
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- Expression
- AK121606
- Nias flcdna
- J033042G12
- Orf evidence
- Q7DLR7 (UniProt)
- Transcript evidence
- AK121606 (DDBJ, Best hit)
![]() | spliced mRNA sequence, including UTRs |
>Os05t0491100-01 Similar to Calmodulin.
GTGGTCGCTGCCTATAAAGGCCCAGCCACAGCCATCTCTTCTCCACCCCCCCCTCGCCACTCGTTCCCCTTCCTTCCTCTCCTCCTCTCGCGGAACCTTCTCGAAGCTTCCACACCCCCAACCTCGCCTCCACCACCAACCCCCCCCCCCCCTCGCCACTCGTTCCCCTTCCTTCCTCTCCTCCTCTCGCGGAACCTTCTCGAAGCTTCCACACCCCCAACCTCGCCTCCACCACCAACCCCCCATGGCGGACCAGCTCACCGACGAGCAGATCGCCGAGTTCAAGGAGGCGTTCAGCCTCTTCGACAAGGACGGCGACGGTTGCATCACTACTAAGGAGCTTGGAACCGTGATGCGGTCCCTTGGTCAGAACCCAACTGAGGCGGAGCTGCAGGACATGATCAACGAGGTTGATGCTGATGGCAATGGGACCATTGACTTCCCAGAGTTCCTGAACCTGATGGCGAAGAAGATGAAGGATACCGACTCTGAGGAGGAGCTCAAGGAGGCCTTCCGTGTGTTTGACAAGGACCAGAACGGTTTCATCTCGGCTGCTGAGCTCCGCCACGTCATGACCAACCTTGGTGAGAAGCTGACCGACGAGGAAGTCGACGAGATGATCCGTGAGGCTGACGTCGATGGCGATGGCCAGATCAACTACGAGGAGTTCGTTAAGGTCATGATGGCCAAGTGAGGAGGGTTCCCATTAAATAAGTTCTGTCTGAAGTGAACTAAAACTGTCAGGGCCTACAACAAAGCTGTACTTTGTGATGTTCCTTTTAAGTACCTATCTTTGCTGGTGGTAATGTTGAGTAGCGATCGGGTTAGGTGGTCTAGTCATGCGAAACAACATCAGATGCCTGGTTTCTTTTGATTGTGATGCTTATCTTGCGCCTGCCGGAGCATAGGATTTGTTGGGGTTTCATCATTTTTCTTGGATCGTTGTGCAGATATGCATTGCCTGGTTCCTTTCT
GTGGTCGCTGCCTATAAAGGCCCAGCCACAGCCATCTCTTCTCCACCCCCCCCTCGCCACTCGTTCCCCTTCCTTCCTCTCCTCCTCTCGCGGAACCTTCTCGAAGCTTCCACACCCCCAACCTCGCCTCCACCACCAACCCCCCCCCCCCCTCGCCACTCGTTCCCCTTCCTTCCTCTCCTCCTCTCGCGGAACCTTCTCGAAGCTTCCACACCCCCAACCTCGCCTCCACCACCAACCCCCCATGGCGGACCAGCTCACCGACGAGCAGATCGCCGAGTTCAAGGAGGCGTTCAGCCTCTTCGACAAGGACGGCGACGGTTGCATCACTACTAAGGAGCTTGGAACCGTGATGCGGTCCCTTGGTCAGAACCCAACTGAGGCGGAGCTGCAGGACATGATCAACGAGGTTGATGCTGATGGCAATGGGACCATTGACTTCCCAGAGTTCCTGAACCTGATGGCGAAGAAGATGAAGGATACCGACTCTGAGGAGGAGCTCAAGGAGGCCTTCCGTGTGTTTGACAAGGACCAGAACGGTTTCATCTCGGCTGCTGAGCTCCGCCACGTCATGACCAACCTTGGTGAGAAGCTGACCGACGAGGAAGTCGACGAGATGATCCGTGAGGCTGACGTCGATGGCGATGGCCAGATCAACTACGAGGAGTTCGTTAAGGTCATGATGGCCAAGTGAGGAGGGTTCCCATTAAATAAGTTCTGTCTGAAGTGAACTAAAACTGTCAGGGCCTACAACAAAGCTGTACTTTGTGATGTTCCTTTTAAGTACCTATCTTTGCTGGTGGTAATGTTGAGTAGCGATCGGGTTAGGTGGTCTAGTCATGCGAAACAACATCAGATGCCTGGTTTCTTTTGATTGTGATGCTTATCTTGCGCCTGCCGGAGCATAGGATTTGTTGGGGTTTCATCATTTTTCTTGGATCGTTGTGCAGATATGCATTGCCTGGTTCCTTTCT
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Os05t0491100-01 | IRGSP_chr05build05r1:24229869..24231760 | n/a | - | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Os05g0491100 | IRGSP_chr05build05r1:24229450..24231905 | 2,456 | - | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon-auto18950250 | IRGSP_chr05build05r1:24229589..24230242 | 654 | - | n/a |
exon | exon-auto18950252 | IRGSP_chr05build05r1:24231685..24231859 | 175 | - | n/a |
exon | exon-auto18950254 | IRGSP_chr05build05r1:24231761..24231905 | 145 | - | n/a |
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- Genetic loci
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- Tomato locus pgdh1 (6-Phosphogluconate dehydrogenase-1)
- Tomato locus pgdh2 (6-Phosphogluconate dehydrogenase-2)
- Tomato locus pgdh3 (6-Phosphogluconate dehydrogenase-3)
- Tomato locus aps2 (Acid phosphatase-2)
- Tomato locus abi (aborted inflorescence)
- Potato locus cam (J04559 calmodulin)
- Tomato locus SlCaM2 (Calmodulin 2)
- Tobacco locus cam2 (calmodulin NtCaM2)
- Tomato locus hl (hairless)
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