Solanum tuberosum mRNA PGSC0003DMT400013627
mRNA details
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| Name | Type | Organism |
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Description
Auxin-responsive protein IAA16
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Location(s)
PGSC_DMv3_219_ch06:4221807..4225494
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GFF source
Cufflinks
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- Mapping depth
- 186.283892
- Source id
- RNASEQ19.4864.0
mRNA sequence
| spliced mRNA sequence, including UTRs |
>PGSC0003DMT400013627 Auxin-responsive protein IAA16
TTAATAAGGTCTACCAAGTCCAATCTAGTTGCTAGTTTATCTCCTTCTCTCCCCTCTATATATTTTAACTCTCACTTTTCTATCTCAAACCAAAAGTACTCTTAAATAAAATAACAAGAAATGATAGGGGAAGAAGAAAAAAGTAGTAATAAGTTGGATTTTGAGGAGACAGAATTAAGGCTAGGGTTGCCTGGGGAAGGAAGAAAAAATGTTCATGATGATAATGATACTTATAATGTTAATGGTAAAAGAGGTTTTGTAGATTTGAAGCTCAATCTTTCTTCTGATATTAACAACATTAAGAATTCAACACTCAAAGCCCCAGCTGTCAAGACACAAATTGTGGGTTGGCCACCAGTAAGGTCCTTTCGAAAGAATATTTTGACTTCCCAGAAGCTTGGCCAAGAGAGTGACAATATTTTAGTGAAGGTGAGCATGGATGGTGCACCTTACCTTAGAAAAGTGGACTTAAACATGTACAAGAGTTATCAAGAATTATCTGATGCCTTAGCCAAGATGTTCAATTCCTTCACTATTGTCCAAGGAATGAAAGACTTCATGAATGAGAGGAAACTGATGGACCTTTTGAATAGTTCTGATTATGTTCCTACCTATGAAGACAAAGATGGTGATTGGATGCTTGTTGGAGATGTCCCATGGGGGATGTTTGTTGATTCTTGCAAACGCTTGCGCATCATGAAAGGAACTGAAGCAATTGGATTAGCACCAAGGGCAATGGAGAAATGCAAGAACAGAAATGGATGAAATCAGGTTGACTTTTTAAAATGAATATAATCGATCAAAATTTCATCGATTATAGCTGGTGCTTGTCCGGATTAAATAGTGTGTTATGTATTAATGCTACTATTATGAAGTGCTTGTAAGTTGTATGTATTAATAATGAGTGTAGCATATTTATTTCTGTATATGTAATTTATTTAGAGCTATAATATTTCTTGTTTAAAACTGACCTTATAAATCGTTTTGTCTAAT
TTAATAAGGTCTACCAAGTCCAATCTAGTTGCTAGTTTATCTCCTTCTCTCCCCTCTATATATTTTAACTCTCACTTTTCTATCTCAAACCAAAAGTACTCTTAAATAAAATAACAAGAAATGATAGGGGAAGAAGAAAAAAGTAGTAATAAGTTGGATTTTGAGGAGACAGAATTAAGGCTAGGGTTGCCTGGGGAAGGAAGAAAAAATGTTCATGATGATAATGATACTTATAATGTTAATGGTAAAAGAGGTTTTGTAGATTTGAAGCTCAATCTTTCTTCTGATATTAACAACATTAAGAATTCAACACTCAAAGCCCCAGCTGTCAAGACACAAATTGTGGGTTGGCCACCAGTAAGGTCCTTTCGAAAGAATATTTTGACTTCCCAGAAGCTTGGCCAAGAGAGTGACAATATTTTAGTGAAGGTGAGCATGGATGGTGCACCTTACCTTAGAAAAGTGGACTTAAACATGTACAAGAGTTATCAAGAATTATCTGATGCCTTAGCCAAGATGTTCAATTCCTTCACTATTGTCCAAGGAATGAAAGACTTCATGAATGAGAGGAAACTGATGGACCTTTTGAATAGTTCTGATTATGTTCCTACCTATGAAGACAAAGATGGTGATTGGATGCTTGTTGGAGATGTCCCATGGGGGATGTTTGTTGATTCTTGCAAACGCTTGCGCATCATGAAAGGAACTGAAGCAATTGGATTAGCACCAAGGGCAATGGAGAAATGCAAGAACAGAAATGGATGAAATCAGGTTGACTTTTTAAAATGAATATAATCGATCAAAATTTCATCGATTATAGCTGGTGCTTGTCCGGATTAAATAGTGTGTTATGTATTAATGCTACTATTATGAAGTGCTTGTAAGTTGTATGTATTAATAATGAGTGTAGCATATTTATTTCTGTATATGTAATTTATTTAGAGCTATAATATTTCTTGTTTAAAACTGACCTTATAAATCGTTTTGTCTAAT
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | PGSC0003DMP400009432 | PGSC_DMv3_219_ch06:4221927..4225266 | n/a | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | PGSC0003DMG400005327 | PGSC_DMv3_219_ch06:4221807..4225494 | 3,688 | n/a | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | PGSC0003DME400036928 | PGSC_DMv3_219_ch06:4221807..4222138 | 332 | + | n/a |
| exon | PGSC0003DME400036929 | PGSC_DMv3_219_ch06:4222785..4222990 | 206 | + | n/a |
| exon | PGSC0003DME400036930 | PGSC_DMv3_219_ch06:4223889..4224012 | 124 | + | n/a |
| exon | PGSC0003DME400036931 | PGSC_DMv3_219_ch06:4224983..4225044 | 62 | + | n/a |
| exon | PGSC0003DME400036932 | PGSC_DMv3_219_ch06:4225226..4225494 | 269 | + | n/a |
| intron | PGSC0003DMI400023773 | PGSC_DMv3_219_ch06:4222139..4222784 | n/a | + | n/a |
| intron | PGSC0003DMI400023774 | PGSC_DMv3_219_ch06:4222991..4223888 | n/a | + | n/a |
| intron | PGSC0003DMI400023775 | PGSC_DMv3_219_ch06:4224013..4224982 | n/a | + | n/a |
| intron | PGSC0003DMI400023776 | PGSC_DMv3_219_ch06:4225045..4225225 | n/a | + | n/a |
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mRNA details
mRNA details

