Solanum tuberosum mRNA PGSC0003DMT400041976
mRNA details
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| Name | Type | Organism |
|
Description
Auxin/indole-3-acetic acid
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|
Location(s)
PGSC_DMv3_219_ch06:34938534..34940990
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GFF source
Cufflinks
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- Mapping depth
- 423.555115
- Source id
- RNASEQ64.2938.0
mRNA sequence
| spliced mRNA sequence, including UTRs |
>PGSC0003DMT400041976 Auxin/indole-3-acetic acid
ATTAATTCCAAAACTTTGTGTGAGTACATATCTCTCTCTTCAATTTCCATATAGTATCATTATTTATTTTGTATAGTAGAGAAGAAAAAGAAGTAATGGACTTGAATCTCAAGGAAACTGAGTTATGTTTGGGGATGCCTGGTGGTGGAGGAGATCACAATATTAAGAAAAGAGGATTTTCACAAACTGTTGATCTCAAACTCAACCTCGATAATCCTTCTATGAACATCAACAATACTTCTTCTAACAAGGACTCTCTCAAGCCACCAACTAAGGCTCAAGTGGTGGGGTGGCCACCAGTAAGATCATTCAGAAAGAACATAATGTCTCAAAAAGGCAACAATAATGTAGAAATTAGTGAGAAGGGAGAAAAAACAATAGCATTTGTGAAGGTCTCCATGGATGGTGCACCTTACCTTCGTAAGGTAGATTTAAAGATGTACAAAAGTTACCAACAACTCTCTGATTCTTTGACCAAGATGTTTAGCTCCTTTACTATGGGTAATTATGGGTCCCAAGGAATGATAGATTTTATGAATGAGAGGAAACTCATGGATGTCCTCAATAGTTCTGACTATGTACCTACCTATGAAGATAAGGATGGGGACTGGATGCTTGTTGGAGATGTACCTTGGCAGATGTTTGTTGATTCATGCAAGCGTTTACGCATAATGAAAGGATCAGAAGCCATTGGACTTGCACCAAGAGCCATGGAGAAATGCAAGAACAGGAGCTGAGCAATTAGTTCAGCAACTCATAAATGGAGACTCAAAAATGTTGATGAAGAATGAAGCAATCAATTTCCATGGTGTCTGTATTTTTATTTGATAGTTAGTAGTATATAAATATATAGATAATTATCTTTGGACATTTGTAATTGGACAAGAAGCAATAAACAAACTTGTTTATTACTAATAGGCTTTGTTTAATT
ATTAATTCCAAAACTTTGTGTGAGTACATATCTCTCTCTTCAATTTCCATATAGTATCATTATTTATTTTGTATAGTAGAGAAGAAAAAGAAGTAATGGACTTGAATCTCAAGGAAACTGAGTTATGTTTGGGGATGCCTGGTGGTGGAGGAGATCACAATATTAAGAAAAGAGGATTTTCACAAACTGTTGATCTCAAACTCAACCTCGATAATCCTTCTATGAACATCAACAATACTTCTTCTAACAAGGACTCTCTCAAGCCACCAACTAAGGCTCAAGTGGTGGGGTGGCCACCAGTAAGATCATTCAGAAAGAACATAATGTCTCAAAAAGGCAACAATAATGTAGAAATTAGTGAGAAGGGAGAAAAAACAATAGCATTTGTGAAGGTCTCCATGGATGGTGCACCTTACCTTCGTAAGGTAGATTTAAAGATGTACAAAAGTTACCAACAACTCTCTGATTCTTTGACCAAGATGTTTAGCTCCTTTACTATGGGTAATTATGGGTCCCAAGGAATGATAGATTTTATGAATGAGAGGAAACTCATGGATGTCCTCAATAGTTCTGACTATGTACCTACCTATGAAGATAAGGATGGGGACTGGATGCTTGTTGGAGATGTACCTTGGCAGATGTTTGTTGATTCATGCAAGCGTTTACGCATAATGAAAGGATCAGAAGCCATTGGACTTGCACCAAGAGCCATGGAGAAATGCAAGAACAGGAGCTGAGCAATTAGTTCAGCAACTCATAAATGGAGACTCAAAAATGTTGATGAAGAATGAAGCAATCAATTTCCATGGTGTCTGTATTTTTATTTGATAGTTAGTAGTATATAAATATATAGATAATTATCTTTGGACATTTGTAATTGGACAAGAAGCAATAAACAAACTTGTTTATTACTAATAGGCTTTGTTTAATT
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | PGSC0003DMP400028445 | PGSC_DMv3_219_ch06:34938629..34940796 | n/a | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | PGSC0003DMG400016280 | PGSC_DMv3_219_ch06:34938534..34940990 | 2,457 | n/a | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | PGSC0003DME400111346 | PGSC_DMv3_219_ch06:34938534..34938807 | 274 | + | n/a |
| exon | PGSC0003DME400111347 | PGSC_DMv3_219_ch06:34939362..34939588 | 227 | + | n/a |
| exon | PGSC0003DME400111348 | PGSC_DMv3_219_ch06:34940083..34940218 | 136 | + | n/a |
| exon | PGSC0003DME400111349 | PGSC_DMv3_219_ch06:34940423..34940484 | 62 | + | n/a |
| exon | PGSC0003DME400111350 | PGSC_DMv3_219_ch06:34940759..34940990 | 232 | + | n/a |
| intron | PGSC0003DMI400070728 | PGSC_DMv3_219_ch06:34938808..34939361 | n/a | + | n/a |
| intron | PGSC0003DMI400070729 | PGSC_DMv3_219_ch06:34939589..34940082 | n/a | + | n/a |
| intron | PGSC0003DMI400070730 | PGSC_DMv3_219_ch06:34940219..34940422 | n/a | + | n/a |
| intron | PGSC0003DMI400070731 | PGSC_DMv3_219_ch06:34940485..34940758 | n/a | + | n/a |
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mRNA details
mRNA details

