Solanum tuberosum mRNA PGSC0003DMT400041851
mRNA details
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| Name | Type | Organism |
|
Description
ARV1
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|
Location(s)
PGSC_DMv3_219_ch11:4571982..4575594
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GFF source
Cufflinks
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- Mapping depth
- 21.653635
- Source id
- RNASEQ27.2325.0
mRNA sequence
| spliced mRNA sequence, including UTRs |
>PGSC0003DMT400041851 ARV1
GAGTGTGTGATTTTAATCTCGGGACGATGTATTAAACTACTGAGCTTTATTGAACTAAAAGAATAGAATTCCAGTTCAGTGGAATAGAATTCAATGGCAGCCCTCTGTTCCTAAAGAGGGCAGCCTTTAAGCATGCATTGTTTAATCGCCTTAACTTGAAAAGACCAAATGTTGGCGGTATGCACAACTCAAGATGAGAGGAGTTTGCCTGCAAGCTTTGCCTCATTTCTGGGGCTTTGTGGAAAGGTGCTCATGGGCGTCTTCTTTGGGAATCTCATGTTCCTTGGCATAATTCTATTTGGCACAAGGAAGTTTCTGAATGCAAAAATAGGAGATTCAAGGTGTAAGCATATATTGCTTTCAATCCTCGTTTCGAGTTACTTCAAGATTTTTGTTATTGCCATGATGGTGTGGGAATTTCCCTCTTCCGTTGTTTTCATCATTAAAATGTTTGTCTTGTCATCTAATGCACTGGCATTACTGGTGATCACAGATGCAGTCATGATTCGATGCATATGGATCTGCTTTGCTGCACATGCCATGAAATTCCTTGTTACTCAAGGTCTAGGAACATATCAAAAGCTAGTTCTTTGGTAGTCATTCAGCAGAGTTCATAAATCCATACTCTTTTAATGGTTGCATCTTGACATTGGCTTGAGAGTAACTTCAAACCTCCAAACGGTTCAGGCTGAAGATCTCATCCTGTGTTGCTTCAGAATCGTCTGATTAGAATTGGGTATCCTGAAAGCTCCTCATTTCTTTTGTCTTTGACATTTCCTACCCGTCCTTTGTCCAACGTACTAGAATAAGCAAGGTGGTGTGTTCTCAGATAGGAAATTTGACTCTGGTGATCGCGGAGATGCCTACGATCAAACATGGAGAGATGGACACTGGTACTCTTACTATGATAACACTAGTTGTTCTATTTTTTCATGTTTTCAATAGAGATATATTTATGTTCTCTGTATAACAGTCCATTTTATAATGTAGGTTAACTCCAAGTCAGGAGAACATGTATTAGGACTATTATTTTGTTATTACCACAATTAATTATCTTTGAGGATGATTTAATGAGTTGAAACAACTACTTTT
GAGTGTGTGATTTTAATCTCGGGACGATGTATTAAACTACTGAGCTTTATTGAACTAAAAGAATAGAATTCCAGTTCAGTGGAATAGAATTCAATGGCAGCCCTCTGTTCCTAAAGAGGGCAGCCTTTAAGCATGCATTGTTTAATCGCCTTAACTTGAAAAGACCAAATGTTGGCGGTATGCACAACTCAAGATGAGAGGAGTTTGCCTGCAAGCTTTGCCTCATTTCTGGGGCTTTGTGGAAAGGTGCTCATGGGCGTCTTCTTTGGGAATCTCATGTTCCTTGGCATAATTCTATTTGGCACAAGGAAGTTTCTGAATGCAAAAATAGGAGATTCAAGGTGTAAGCATATATTGCTTTCAATCCTCGTTTCGAGTTACTTCAAGATTTTTGTTATTGCCATGATGGTGTGGGAATTTCCCTCTTCCGTTGTTTTCATCATTAAAATGTTTGTCTTGTCATCTAATGCACTGGCATTACTGGTGATCACAGATGCAGTCATGATTCGATGCATATGGATCTGCTTTGCTGCACATGCCATGAAATTCCTTGTTACTCAAGGTCTAGGAACATATCAAAAGCTAGTTCTTTGGTAGTCATTCAGCAGAGTTCATAAATCCATACTCTTTTAATGGTTGCATCTTGACATTGGCTTGAGAGTAACTTCAAACCTCCAAACGGTTCAGGCTGAAGATCTCATCCTGTGTTGCTTCAGAATCGTCTGATTAGAATTGGGTATCCTGAAAGCTCCTCATTTCTTTTGTCTTTGACATTTCCTACCCGTCCTTTGTCCAACGTACTAGAATAAGCAAGGTGGTGTGTTCTCAGATAGGAAATTTGACTCTGGTGATCGCGGAGATGCCTACGATCAAACATGGAGAGATGGACACTGGTACTCTTACTATGATAACACTAGTTGTTCTATTTTTTCATGTTTTCAATAGAGATATATTTATGTTCTCTGTATAACAGTCCATTTTATAATGTAGGTTAACTCCAAGTCAGGAGAACATGTATTAGGACTATTATTTTGTTATTACCACAATTAATTATCTTTGAGGATGATTTAATGAGTTGAAACAACTACTTTT
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | PGSC0003DMP400028364 | PGSC_DMv3_219_ch11:4572559..4575426 | n/a | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | PGSC0003DMG400016241 | PGSC_DMv3_219_ch11:4571982..4577685 | 5,704 | n/a | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | PGSC0003DME400111015 | PGSC_DMv3_219_ch11:4571982..4572386 | 405 | - | n/a |
| exon | PGSC0003DME400111017 | PGSC_DMv3_219_ch11:4572469..4572671 | 203 | - | n/a |
| exon | PGSC0003DME400111019 | PGSC_DMv3_219_ch11:4574251..4574326 | 76 | - | n/a |
| exon | PGSC0003DME400111020 | PGSC_DMv3_219_ch11:4574427..4574493 | 67 | - | n/a |
| exon | PGSC0003DME400111021 | PGSC_DMv3_219_ch11:4575150..4575244 | 95 | - | n/a |
| exon | PGSC0003DME400111023 | PGSC_DMv3_219_ch11:4575349..4575594 | 246 | - | n/a |
| intron | PGSC0003DMI400070495 | PGSC_DMv3_219_ch11:4572387..4572468 | n/a | - | n/a |
| intron | PGSC0003DMI400070496 | PGSC_DMv3_219_ch11:4572672..4574250 | n/a | - | n/a |
| intron | PGSC0003DMI400070497 | PGSC_DMv3_219_ch11:4574327..4574426 | n/a | - | n/a |
| intron | PGSC0003DMI400070498 | PGSC_DMv3_219_ch11:4574494..4575149 | n/a | - | n/a |
| intron | PGSC0003DMI400070499 | PGSC_DMv3_219_ch11:4575245..4575348 | n/a | - | n/a |
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mRNA details
mRNA details

