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Tomato locus zeaxanthin epoxidase
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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zeaxanthin epoxidase is on PhyloGenes
TomDelDB genotype frequencies in tomato populations. chromosome SL2.50ch02, position: 52374025
Please cite Razifard et al.
Registry name: | None | [Associate registry name] |
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![]() ![]() | [Associate accession] |
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![]() ![]() | [Associate new locus] |
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![]() ![]() | View zeaxanthin epoxidase relationships in the stand-alone network browser |
[loading...] | [Legend] [Levels] |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>Solyc02g090890.2 SL2.50ch02:52375308..52369708 (sequence from reverse strand)
TAATTAACAACTCCCATATATCATCTAACTTCTTCTTTTCACTGAATCATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTGGTAAATTCACATCACTATGATTTCTTTGTGCTAATTAGGTGCTTGTTTATGCTTTACTCTGATATGTTTTACTTGAGTCGACATCAAAAGTTAGGGATACCACCCTCCTCAGAACCCACTCGTGTGCTTGTCCGAAGAGAAACTCTTGGTGTTATTTAACAGTAACAATCATACACAAGCTTTTACTAAGGATAACTGAAGAAGATAATGAAATACTTAAGTCTTTCAGAAAATTATACTGAAATTATTTGAGGGAAAATAATTCATTTAGTGAAAAGTTTATTGAGTCATAGTTGTTGAGCTTATTCCGGAAAAGGATCCATATTTACCTGCAATCAGATTGGTGAATTGGTCTCGTTATTGTATGAACAGCTTTATTATGAGAACAGTTCCTTTTTAGTTCTTGAACTGCACACAGTGACAATAGTTGGTTTTCAGGTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAGGTATCTGGCTATTTCCAAAACTCAAAATATCAAGAAAGATTAGAACTTCTGTTAGTTTCATTTAAGATTGTGTCGATCAGTGTCAATGGTAGCTAATTGTTGTGTCTTATTAATCAATTTTCATTATAGCTTCTCATGTTTGTGTGAAATCAGGTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAGGTATTCAAAATCAGTCTCATTCTATTTCCTTCTAATATTGCTACTTGTGTTGATTACAAGGATAGAGTAACTTGTCCATATGTTACTTTGAGATTGTGGTCCATGTTAAAAAAGTAGTTGGTCAATTCGGCTTGGTTTAGAAGATCTCAAACATTGGTGTTTATTGTAGGTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGGGTATGATATTCTTACTTATCGGATTGTCTTTTCCCTCTTCATGTCCTTAGCTGGTCCCCTTATGCTCATGCTATGTTGTCATAGTAAAGGTTAAATTCAGATTTCTTTTCTGAAGGTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACGGTAAGAGTTTTTAGGCCGTTTGTAGTTCAGGATATAAACGTGCTTACTAGAAGACGTTTCTGAATGCTTGACTTGTTAAGTAATGTCTATATAACCCAAGGGGTTTCTCGAGGATTTTTCCTTGTTGAGACCTGATTATAGTGCTGCAATAAGGTAAAGAAGAAGTCAAGATTAGAATGAGATAGATTCAATGAATTGTGAGTTGGAAAGTTTTGAATTGAAGTGCTGATTCATGCATAATCTAACTTTTGGTAAGCAGTTGCACTCTTACTCATCTAATTCATTTCTGAAGAGTTTCAGAGAATGATGCACCACAATTCTTTGTTTCTACTCATAGATGTGAGGTCCTTACTTCATCACAGAAATTGTTTATTAACTTGTATATGAAACGCATGTCTTATTATATTGTTGTAGTAGTACCAGTTTGGATAAAAGAATCACAAACTTTTGGGGGGTTGGCACTACATGAGATGAGTATGGTATCTTGACACTCTAAATTGCCACTATGATGCTCAAGAGGTTAGGAAATATATGTAGTCATATTGTCATTACATTGGTTGTCAATAGTTTATCTGTTCATGCTGCAGGTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAGGTACATTCTTTATAGTAACCTTTTTTACTTCACTTAATTAACATGGTATTATTGGTCGATTCTATCCCTTAGTCCCTTCTATCTAAGAACTAAGAAGTAGGGTATTATTGTTATGTTGTGTAAGCCACTGAACGTTTCCTTTTACAACTACAGGATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAGGTAATCCATTATTTATTGGCTCAAGTGATGTATAGTGGTTGCTTGAATACACGCTGTTTGACAATTGAAAAGTCATTTAAAATTGGCTGAAGTCTTAACTTCACCTTACCACCAGCCAAGAAAGCCTGCTTTAAATGCCTAAATGAAGATGAATTGACTTGAACAACTTCTGTTTCTGCCAGTTAGCTGATCCTTTTATGATTTTCTGTATCCACAGCTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCAGTATGGAAATCTGTCTCTCTTTGAAATATGAGTAGCTAAGTTGTCTGATTTAGCATAGATCTTCTTATGATATGGATTTGGATTTCTATCATTTTTTGCAGTTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGGGTAGGGAATATGCAGGCCTTTTCTTGGTTCAATATTTTAAACATGAACTTGATTTTACTTATGTGATCAGCCTATAGCTAGAGAGTGAAATTGCAAAGCCATATATTTATTTTTACTTCTAATGCTTCTTGCGGTGAACCCTTCCTTTTATCACAGTTCAATGGTTCATGATTATTCTGTTGATTCTGTTTAGTCGGAACTTTTACTCGAAATTCTTTTATTGTACCTAAGCTTCAAATTATTAGTTCTTTTTTGTTCGGAAAAATTAGAAGTTGAGCTTTCCCTCATCCTTGATGAGTTCAATGGATTCTTGGAAGTTGATAAACTAGTAGTTTGACTCGGCTTTTTTTTTCTTGCAGGGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAAGTATGTAGACTAAGGAATTATGCACATAAAAAATTGTGGTTTCCATTGTTACATAATTAACAAGTATGAATTTTATGGGAGTATTAATACACTGTATTGTGGTAATGAAGGCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGAGTGAGTTTGACAAGCTTAATCTTTACAAATTTCATTTATATGTATGTCCTGTTTTTCTTGTTTGCTTGCTAATTTTGATGCTTAATTTTTATCTTTCAGGTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGGGTATGCTTTTAGGTTATGGTTTATTGGATTTAAGATTGTTCATAGCTGACTGTTACGTCTTTGTGGCACATAGTTTAAAAGATTTAAATAGTTCAAGTCATTTTATTACTTAGCTCTCGACATAATCATACACTATGGTGTGCATCAGTTGCAAATATTTCACCATCAATCTCCTCTAATTTACACATCCAATCCATGCACATACTTTCAAAACTGTGAACCAGACAAAAAATGAATTTCACTTGGCTGTAAAGGGAGAATGTATAACGCAATATTGTTTTATTAGAATAGTCACTGACAGGCTTTTGGTTTCAGGTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAGGTGATTGCCATATTATTCTATAGCTCAGTATCCTGGACCTTCTTCTGGTGAATGCATGATTGAATTGTCAAATTTCTTTTTTAATCTCAGGTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGAGTAAGTTCCATGTGTTCCTGTATACAACTCTACTATTAGATATCCCATTTTATGAAAACAATAGTTACGATTGATCTGCGTTATCATGTAGTAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAGGTGAGATTCATCAAAGTATTTTCTCTTTAACGCAAAACTTTGGCATTAGCATTATTCTTTTAAACCGTCATGTGCAGGCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTATATACAATTATAGTCTAGATCTACTTCATAAATATTTTCGTATGACAAGTCTTCAATTTCAAA
TAATTAACAACTCCCATATATCATCTAACTTCTTCTTTTCACTGAATCATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTGGTAAATTCACATCACTATGATTTCTTTGTGCTAATTAGGTGCTTGTTTATGCTTTACTCTGATATGTTTTACTTGAGTCGACATCAAAAGTTAGGGATACCACCCTCCTCAGAACCCACTCGTGTGCTTGTCCGAAGAGAAACTCTTGGTGTTATTTAACAGTAACAATCATACACAAGCTTTTACTAAGGATAACTGAAGAAGATAATGAAATACTTAAGTCTTTCAGAAAATTATACTGAAATTATTTGAGGGAAAATAATTCATTTAGTGAAAAGTTTATTGAGTCATAGTTGTTGAGCTTATTCCGGAAAAGGATCCATATTTACCTGCAATCAGATTGGTGAATTGGTCTCGTTATTGTATGAACAGCTTTATTATGAGAACAGTTCCTTTTTAGTTCTTGAACTGCACACAGTGACAATAGTTGGTTTTCAGGTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAGGTATCTGGCTATTTCCAAAACTCAAAATATCAAGAAAGATTAGAACTTCTGTTAGTTTCATTTAAGATTGTGTCGATCAGTGTCAATGGTAGCTAATTGTTGTGTCTTATTAATCAATTTTCATTATAGCTTCTCATGTTTGTGTGAAATCAGGTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAGGTATTCAAAATCAGTCTCATTCTATTTCCTTCTAATATTGCTACTTGTGTTGATTACAAGGATAGAGTAACTTGTCCATATGTTACTTTGAGATTGTGGTCCATGTTAAAAAAGTAGTTGGTCAATTCGGCTTGGTTTAGAAGATCTCAAACATTGGTGTTTATTGTAGGTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGGGTATGATATTCTTACTTATCGGATTGTCTTTTCCCTCTTCATGTCCTTAGCTGGTCCCCTTATGCTCATGCTATGTTGTCATAGTAAAGGTTAAATTCAGATTTCTTTTCTGAAGGTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACGGTAAGAGTTTTTAGGCCGTTTGTAGTTCAGGATATAAACGTGCTTACTAGAAGACGTTTCTGAATGCTTGACTTGTTAAGTAATGTCTATATAACCCAAGGGGTTTCTCGAGGATTTTTCCTTGTTGAGACCTGATTATAGTGCTGCAATAAGGTAAAGAAGAAGTCAAGATTAGAATGAGATAGATTCAATGAATTGTGAGTTGGAAAGTTTTGAATTGAAGTGCTGATTCATGCATAATCTAACTTTTGGTAAGCAGTTGCACTCTTACTCATCTAATTCATTTCTGAAGAGTTTCAGAGAATGATGCACCACAATTCTTTGTTTCTACTCATAGATGTGAGGTCCTTACTTCATCACAGAAATTGTTTATTAACTTGTATATGAAACGCATGTCTTATTATATTGTTGTAGTAGTACCAGTTTGGATAAAAGAATCACAAACTTTTGGGGGGTTGGCACTACATGAGATGAGTATGGTATCTTGACACTCTAAATTGCCACTATGATGCTCAAGAGGTTAGGAAATATATGTAGTCATATTGTCATTACATTGGTTGTCAATAGTTTATCTGTTCATGCTGCAGGTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAGGTACATTCTTTATAGTAACCTTTTTTACTTCACTTAATTAACATGGTATTATTGGTCGATTCTATCCCTTAGTCCCTTCTATCTAAGAACTAAGAAGTAGGGTATTATTGTTATGTTGTGTAAGCCACTGAACGTTTCCTTTTACAACTACAGGATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAGGTAATCCATTATTTATTGGCTCAAGTGATGTATAGTGGTTGCTTGAATACACGCTGTTTGACAATTGAAAAGTCATTTAAAATTGGCTGAAGTCTTAACTTCACCTTACCACCAGCCAAGAAAGCCTGCTTTAAATGCCTAAATGAAGATGAATTGACTTGAACAACTTCTGTTTCTGCCAGTTAGCTGATCCTTTTATGATTTTCTGTATCCACAGCTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCAGTATGGAAATCTGTCTCTCTTTGAAATATGAGTAGCTAAGTTGTCTGATTTAGCATAGATCTTCTTATGATATGGATTTGGATTTCTATCATTTTTTGCAGTTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGGGTAGGGAATATGCAGGCCTTTTCTTGGTTCAATATTTTAAACATGAACTTGATTTTACTTATGTGATCAGCCTATAGCTAGAGAGTGAAATTGCAAAGCCATATATTTATTTTTACTTCTAATGCTTCTTGCGGTGAACCCTTCCTTTTATCACAGTTCAATGGTTCATGATTATTCTGTTGATTCTGTTTAGTCGGAACTTTTACTCGAAATTCTTTTATTGTACCTAAGCTTCAAATTATTAGTTCTTTTTTGTTCGGAAAAATTAGAAGTTGAGCTTTCCCTCATCCTTGATGAGTTCAATGGATTCTTGGAAGTTGATAAACTAGTAGTTTGACTCGGCTTTTTTTTTCTTGCAGGGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAAGTATGTAGACTAAGGAATTATGCACATAAAAAATTGTGGTTTCCATTGTTACATAATTAACAAGTATGAATTTTATGGGAGTATTAATACACTGTATTGTGGTAATGAAGGCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGAGTGAGTTTGACAAGCTTAATCTTTACAAATTTCATTTATATGTATGTCCTGTTTTTCTTGTTTGCTTGCTAATTTTGATGCTTAATTTTTATCTTTCAGGTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGGGTATGCTTTTAGGTTATGGTTTATTGGATTTAAGATTGTTCATAGCTGACTGTTACGTCTTTGTGGCACATAGTTTAAAAGATTTAAATAGTTCAAGTCATTTTATTACTTAGCTCTCGACATAATCATACACTATGGTGTGCATCAGTTGCAAATATTTCACCATCAATCTCCTCTAATTTACACATCCAATCCATGCACATACTTTCAAAACTGTGAACCAGACAAAAAATGAATTTCACTTGGCTGTAAAGGGAGAATGTATAACGCAATATTGTTTTATTAGAATAGTCACTGACAGGCTTTTGGTTTCAGGTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAGGTGATTGCCATATTATTCTATAGCTCAGTATCCTGGACCTTCTTCTGGTGAATGCATGATTGAATTGTCAAATTTCTTTTTTAATCTCAGGTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGAGTAAGTTCCATGTGTTCCTGTATACAACTCTACTATTAGATATCCCATTTTATGAAAACAATAGTTACGATTGATCTGCGTTATCATGTAGTAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAGGTGAGATTCATCAAAGTATTTTCTCTTTAACGCAAAACTTTGGCATTAGCATTATTCTTTTAAACCGTCATGTGCAGGCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTATATACAATTATAGTCTAGATCTACTTCATAAATATTTTCGTATGACAAGTCTTCAATTTCAAA
Download sequence region |
Get flanking sequences on SL2.50ch02
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![]() ![]() | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>Solyc02g090890.2.1 Zeaxanthin epoxidase, chloroplastic
TAATTAACAACTCCCATATATCATCTAACTTCTTCTTTTCACTGAATCATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTGGTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAGGTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAGGTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGGGTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACGGTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAGGATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAGCTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCATTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGGGGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAAGCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGAGTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGGGTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAGGTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGATAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAGGCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTATATACAATTATAGTCTAGATCTACTTCATAAATATTTTCGTATGACAAGTCTTCAATTTCAAA
TAATTAACAACTCCCATATATCATCTAACTTCTTCTTTTCACTGAATCATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTGGTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAGGTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAGGTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGGGTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACGGTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAGGATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAGCTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCATTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGGGGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAAGCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGAGTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGGGTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAGGTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGATAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAGGCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTATATACAATTATAGTCTAGATCTACTTCATAAATATTTTCGTATGACAAGTCTTCAATTTCAAA
![]() ![]() | translated polypeptide sequence |
>Solyc02g090890.2.1 Zeaxanthin epoxidase, chloroplastic
MYSTVFYTSVHPSTSVLSRKQLPLLISKDFSAELYHSLPCRSLENGHINKVKGVKVKATIAEAPVTPTEKTDSGANGDLKVPQKKLKVLVAGGGIGGLVFALAAKKRGFDVLVFERDLSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEDIMNAGCITGQRINGLVDGISGNWYCKFDTFTPAVERGLPVTRVISRMTLQQILARAVGEEIIMNESNVVDFEDDGEKVTVVLENGQRFTGDLLVGADGIRSKVRTNLFGPSEATYSGYTCYTGIADFVPADIDTVGYRVFLGHKQYFVSSDVGGGKMQWYAFYNEPAGGADAPNGKKERLLKIFGGWCDNVIDLLVATDEDAILRRDIYDRPPTFSWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDSYQLALELEKACSRSAESGSPVDIISSLRSYESARKLRVGVIHGLARMAAIMASTYKAYLGVGLGPLSFLTQYRIPHPGRVGGRVFIDLGMPLMLSWVLGGNGDKLEGRIKHCRLSEKANDQLRKWFEDDDALERATDAEWLLLPAGNGSSGLEAIVLSRDEDVPCTVGSISHTNIPGKSIVLPLPQVSEMHARISCKDGAFFVTDLRSEHGTWVTDNEGRRYRTSPNFPTRFHPSDVIEFGSDKAAFRVKAMKFPLKTSERKEEREAVEAA*
MYSTVFYTSVHPSTSVLSRKQLPLLISKDFSAELYHSLPCRSLENGHINKVKGVKVKATIAEAPVTPTEKTDSGANGDLKVPQKKLKVLVAGGGIGGLVFALAAKKRGFDVLVFERDLSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEDIMNAGCITGQRINGLVDGISGNWYCKFDTFTPAVERGLPVTRVISRMTLQQILARAVGEEIIMNESNVVDFEDDGEKVTVVLENGQRFTGDLLVGADGIRSKVRTNLFGPSEATYSGYTCYTGIADFVPADIDTVGYRVFLGHKQYFVSSDVGGGKMQWYAFYNEPAGGADAPNGKKERLLKIFGGWCDNVIDLLVATDEDAILRRDIYDRPPTFSWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDSYQLALELEKACSRSAESGSPVDIISSLRSYESARKLRVGVIHGLARMAAIMASTYKAYLGVGLGPLSFLTQYRIPHPGRVGGRVFIDLGMPLMLSWVLGGNGDKLEGRIKHCRLSEKANDQLRKWFEDDDALERATDAEWLLLPAGNGSSGLEAIVLSRDEDVPCTVGSISHTNIPGKSIVLPLPQVSEMHARISCKDGAFFVTDLRSEHGTWVTDNEGRRYRTSPNFPTRFHPSDVIEFGSDKAAFRVKAMKFPLKTSERKEEREAVEAA*
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EF581828 zeaxanthin epoxidase [Solanum lycopersicum]
EU004202 chloroplast zeaxanthin epoxidase precursor [Solanum lycopersicum]
AC215355 Solanum lycopersicum Tomato chromosome 2, C02HBa0012A12
AC215383 Solanum lycopersicum Tomato chromosome 2, C02HBa0104A12
Z83835 L.esculentum mRNA for zeaxanthin epoxidase.
EU004202 chloroplast zeaxanthin epoxidase precursor [Solanum lycopersicum]
AC215355 Solanum lycopersicum Tomato chromosome 2, C02HBa0012A12
AC215383 Solanum lycopersicum Tomato chromosome 2, C02HBa0104A12
Z83835 L.esculentum mRNA for zeaxanthin epoxidase.
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
Abscisic acid biosynthesis in tomato: regulation of zeaxanthin epoxidase and 9-cis-epoxycarotenoid dioxygenase mRNAs by light/dark cycles, water stress and abscisic acid.
Plant molecular biology (2000)
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Two genes encoding enzymes in the abscisic acid (ABA) biosynthesis pathway, zeaxanthin epoxidase (ZEP) and 9-cis-epoxycarotenoid dioxygenase (NCED), have previously been cloned by transposon tagging in Nicotiana plumbaginifolia and maize respectively. We demonstrate that antisense down-regulation of the tomato gene LeZEP1 causes accumulation of zeaxanthin in leaves, suggesting that this gene also encodes ZEP. LeNCED1 is known to encode NCED from characterization of a null mutation (notabilis) in tomato. We have used LeZEP1 and LeNCED1 as probes to study gene expression in leaves and roots of whole plants given drought treatments, during light/dark cycles, and during dehydration of detached leaves. During drought stress, NCED mRNA increased in both leaves and roots, whereas ZEP mRNA increased in roots but not leaves. When detached leaves were dehydrated, NCED mRNA responded rapidly to small reductions in water content. Using a detached leaf system with ABA-deficient mutants and ABA feeding, we investigated the possibility that NCED mRNA is regulated by the end product of the pathway, ABA, but found no evidence that this is the case. We also describe strong diurnal expression patterns for both ZEP and NCED, with the two genes displaying distinctly different patterns. ZEP mRNA oscillated with a phase very similar to light-harvesting complex II (LHCII) mRNA, and oscillations continued in a 48 h dark period. NCED mRNA oscillated with a different phase and remained low during a 48 h dark period. Implications for regulation of water stress-induced ABA biosynthesis are discussed.
Thompson, A. Jackson, A. Parker, R. Morpeth, D. Burbidge, A. Taylor, I.
Plant molecular biology.
2000.
42(6).
833-45.
Abscisic acid deficiency in the tomato mutant high-pigment 3 leading to increased plastid number and higher fruit lycopene content.
The Plant journal : for cell and molecular biology (2008)
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Carotenoids are present in most tissues of higher plants where they play a variety of essential roles. To study the regulation of carotenoid biosynthesis, we have isolated novel mutations in tomato (Solanum lycopersicum) with altered pigmentation of fruit or flowers. Here we describe the isolation and analysis of a tomato mutant, high-pigment 3 (hp3), that accumulates 30% more carotenoids in the mature fruit. Higher concentrations of carotenoids and chlorophyll were also measured in leaves and the pericarp of green fruit. The mutation in hp3 had occurred in the gene for zeaxanthin epoxidase (Zep), which converts zeaxanthin to violaxanthin. Consequently, leaves of the mutant lack violaxanthin and neoxanthin, and flowers contain only minute quantities of these xanthophylls. The concentration in the hp3 mutant of abscisic acid (ABA), which is derived from xanthophylls, is 75% lower than the normal level, making hp3 an ABA-deficient mutant. The plastid compartment size in fruit cells is at least twofold larger in hp3 plants compared with the wild-type. The transcript level in the green fruit of FtsZ, which encodes a tubulin-like protein involved in plastid division, is 60% higher in hp3 than in the wild-type, suggesting that increased plastid division is responsible for this phenomenon. Elevated fruit pigmentation and plastid compartment size were also observed in the ABA-deficient mutants flacca and sitiens. Taken together, these results suggest that ABA deficiency in the tomato mutant hp3 leads to enlargement of the plastid compartment size, probably by increasing plastid division, thus enabling greater biosynthesis and a higher storage capacity of the pigments.
Galpaz, N. Wang, Q. Menda, N. Zamir, D. Hirschberg, J.
The Plant journal : for cell and molecular biology.
2008.
53(5).
717-30.
Overexpression of zeaxanthin epoxidase gene enhances the sensitivity of tomato PSII photoinhibition to high light and chilling stress.
Physiologia plantarum (2008)
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A tomato (Lycopersicon esculentum Mill.) zeaxanthin epoxidase gene (LeZE) was isolated. The deduced amino acid sequence of LeZE showed high identities with zeaxanthin epoxidase in other plant species. Northern blot analysis showed that the mRNA accumulation of LeZE in the wild-type (WT) was not induced by light and temperature but regulated by the diurnal rhythm. The sense transgenic plants were obtained under the control of the cauliflower mosaic virus 35S promoter (35S-CaMV). Northern and western blot analysis confirmed that sense LeZE was transferred into the tomato genome and overexpressed. The ratio of (A + Z)/(V + A + Z) and the values of non-photochemical quenching were lower in transgenic plants than in WT plants under high light and chilling stress with low irradiance. The O(2) evolution rate and the maximal photochemical efficiency of PSII (Fv/Fm) in transgenic plants decreased more quickly during both stresses and recovered slower than that in WT under optimal conditions. These results suggested that overexpression of LeZE impaired the function of the xanthophyll cycle and aggravated PSII photoinhibition in tomato under high light and chilling stress.
Wang, N. Fang, W. Han, H. Sui, N. Li, B. Meng, QW.
Physiologia plantarum.
2008.
132(3).
384-96.
Structure and expression of a cDNA encoding zeaxanthin epoxidase isolated from a wilt-related tomato (Lycopersicon esculentum Mill.) library'
Journal Of Experimental Botany (1997)
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Burbidge, A. Grieve, TM. Terry, C. Corlett, JE. Thompson, AJ. Taylor, IB.
Journal Of Experimental Botany.
1997.
48().
1749-1750.
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