Sol Genomics Network

Solanum lycopersicum gene Solyc02g090890.2

Name Solyc02g090890.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc02g090890	Length 5,601

Description

Zeaxanthin epoxidase, chloroplastic

Location(s)

SL2.50ch02:52369708..52375308

GFF source

ITAG_eugene

From BOGAS: 1

Length: 5601

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc02g090890.2.1	SL2.50ch02:52369708..52375308	2,527	-	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc02g090890.2 SL2.50ch02:52375308..52369708 (sequence from reverse strand)
TAATTAACAACTCCCATATATCATCTAACTTCTTCTTTTCACTGAATCATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTGGTAAATTCACATCACTATGATTTCTTTGTGCTAATTAGGTGCTTGTTTATGCTTTACTCTGATATGTTTTACTTGAGTCGACATCAAAAGTTAGGGATACCACCCTCCTCAGAACCCACTCGTGTGCTTGTCCGAAGAGAAACTCTTGGTGTTATTTAACAGTAACAATCATACACAAGCTTTTACTAAGGATAACTGAAGAAGATAATGAAATACTTAAGTCTTTCAGAAAATTATACTGAAATTATTTGAGGGAAAATAATTCATTTAGTGAAAAGTTTATTGAGTCATAGTTGTTGAGCTTATTCCGGAAAAGGATCCATATTTACCTGCAATCAGATTGGTGAATTGGTCTCGTTATTGTATGAACAGCTTTATTATGAGAACAGTTCCTTTTTAGTTCTTGAACTGCACACAGTGACAATAGTTGGTTTTCAGGTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAGGTATCTGGCTATTTCCAAAACTCAAAATATCAAGAAAGATTAGAACTTCTGTTAGTTTCATTTAAGATTGTGTCGATCAGTGTCAATGGTAGCTAATTGTTGTGTCTTATTAATCAATTTTCATTATAGCTTCTCATGTTTGTGTGAAATCAGGTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAGGTATTCAAAATCAGTCTCATTCTATTTCCTTCTAATATTGCTACTTGTGTTGATTACAAGGATAGAGTAACTTGTCCATATGTTACTTTGAGATTGTGGTCCATGTTAAAAAAGTAGTTGGTCAATTCGGCTTGGTTTAGAAGATCTCAAACATTGGTGTTTATTGTAGGTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGGGTATGATATTCTTACTTATCGGATTGTCTTTTCCCTCTTCATGTCCTTAGCTGGTCCCCTTATGCTCATGCTATGTTGTCATAGTAAAGGTTAAATTCAGATTTCTTTTCTGAAGGTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACGGTAAGAGTTTTTAGGCCGTTTGTAGTTCAGGATATAAACGTGCTTACTAGAAGACGTTTCTGAATGCTTGACTTGTTAAGTAATGTCTATATAACCCAAGGGGTTTCTCGAGGATTTTTCCTTGTTGAGACCTGATTATAGTGCTGCAATAAGGTAAAGAAGAAGTCAAGATTAGAATGAGATAGATTCAATGAATTGTGAGTTGGAAAGTTTTGAATTGAAGTGCTGATTCATGCATAATCTAACTTTTGGTAAGCAGTTGCACTCTTACTCATCTAATTCATTTCTGAAGAGTTTCAGAGAATGATGCACCACAATTCTTTGTTTCTACTCATAGATGTGAGGTCCTTACTTCATCACAGAAATTGTTTATTAACTTGTATATGAAACGCATGTCTTATTATATTGTTGTAGTAGTACCAGTTTGGATAAAAGAATCACAAACTTTTGGGGGGTTGGCACTACATGAGATGAGTATGGTATCTTGACACTCTAAATTGCCACTATGATGCTCAAGAGGTTAGGAAATATATGTAGTCATATTGTCATTACATTGGTTGTCAATAGTTTATCTGTTCATGCTGCAGGTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAGGTACATTCTTTATAGTAACCTTTTTTACTTCACTTAATTAACATGGTATTATTGGTCGATTCTATCCCTTAGTCCCTTCTATCTAAGAACTAAGAAGTAGGGTATTATTGTTATGTTGTGTAAGCCACTGAACGTTTCCTTTTACAACTACAGGATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAGGTAATCCATTATTTATTGGCTCAAGTGATGTATAGTGGTTGCTTGAATACACGCTGTTTGACAATTGAAAAGTCATTTAAAATTGGCTGAAGTCTTAACTTCACCTTACCACCAGCCAAGAAAGCCTGCTTTAAATGCCTAAATGAAGATGAATTGACTTGAACAACTTCTGTTTCTGCCAGTTAGCTGATCCTTTTATGATTTTCTGTATCCACAGCTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCAGTATGGAAATCTGTCTCTCTTTGAAATATGAGTAGCTAAGTTGTCTGATTTAGCATAGATCTTCTTATGATATGGATTTGGATTTCTATCATTTTTTGCAGTTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGGGTAGGGAATATGCAGGCCTTTTCTTGGTTCAATATTTTAAACATGAACTTGATTTTACTTATGTGATCAGCCTATAGCTAGAGAGTGAAATTGCAAAGCCATATATTTATTTTTACTTCTAATGCTTCTTGCGGTGAACCCTTCCTTTTATCACAGTTCAATGGTTCATGATTATTCTGTTGATTCTGTTTAGTCGGAACTTTTACTCGAAATTCTTTTATTGTACCTAAGCTTCAAATTATTAGTTCTTTTTTGTTCGGAAAAATTAGAAGTTGAGCTTTCCCTCATCCTTGATGAGTTCAATGGATTCTTGGAAGTTGATAAACTAGTAGTTTGACTCGGCTTTTTTTTTCTTGCAGGGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAAGTATGTAGACTAAGGAATTATGCACATAAAAAATTGTGGTTTCCATTGTTACATAATTAACAAGTATGAATTTTATGGGAGTATTAATACACTGTATTGTGGTAATGAAGGCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGAGTGAGTTTGACAAGCTTAATCTTTACAAATTTCATTTATATGTATGTCCTGTTTTTCTTGTTTGCTTGCTAATTTTGATGCTTAATTTTTATCTTTCAGGTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGGGTATGCTTTTAGGTTATGGTTTATTGGATTTAAGATTGTTCATAGCTGACTGTTACGTCTTTGTGGCACATAGTTTAAAAGATTTAAATAGTTCAAGTCATTTTATTACTTAGCTCTCGACATAATCATACACTATGGTGTGCATCAGTTGCAAATATTTCACCATCAATCTCCTCTAATTTACACATCCAATCCATGCACATACTTTCAAAACTGTGAACCAGACAAAAAATGAATTTCACTTGGCTGTAAAGGGAGAATGTATAACGCAATATTGTTTTATTAGAATAGTCACTGACAGGCTTTTGGTTTCAGGTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAGGTGATTGCCATATTATTCTATAGCTCAGTATCCTGGACCTTCTTCTGGTGAATGCATGATTGAATTGTCAAATTTCTTTTTTAATCTCAGGTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGAGTAAGTTCCATGTGTTCCTGTATACAACTCTACTATTAGATATCCCATTTTATGAAAACAATAGTTACGATTGATCTGCGTTATCATGTAGTAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAGGTGAGATTCATCAAAGTATTTTCTCTTTAACGCAAAACTTTGGCATTAGCATTATTCTTTTAAACCGTCATGTGCAGGCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTATATACAATTATAGTCTAGATCTACTTCATAAATATTTTCGTATGACAAGTCTTCAATTTCAAA

Download sequence region

Download sequence (5.5Kb)

Get flanking sequences on SL2.50ch02

mRNA Solyc02g090890.2.1

Ontology terms

terms associated with this mRNA

GO:0009540 – zeaxanthin epoxidase [overall] activity

cDNA sequence

spliced cDNA sequence, including UTRs

>Solyc02g090890.2.1 Zeaxanthin epoxidase, chloroplastic
TAATTAACAACTCCCATATATCATCTAACTTCTTCTTTTCACTGAATCATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTGGTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAGGTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAGGTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGGGTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACGGTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAGGATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAGCTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCATTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGGGGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAAGCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGAGTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGGGTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAGGTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGATAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAGGCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTATATACAATTATAGTCTAGATCTACTTCATAAATATTTTCGTATGACAAGTCTTCAATTTCAAA

Download sequence (2.5Kb)

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc02g090890.2.1	SL2.50ch02:52369994..52375078	670	-	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc02g090890.2	SL2.50ch02:52369708..52375308	5,601	-	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc02g090890.2.1.1	SL2.50ch02:52374558..52375308	751	-	1
exon	exon:Solyc02g090890.2.1.10	SL2.50ch02:52371242..52371287	46	-	n/a
exon	exon:Solyc02g090890.2.1.11	SL2.50ch02:52371067..52371131	65	-	1
exon	exon:Solyc02g090890.2.1.12	SL2.50ch02:52370881..52370967	87	-	1
exon	exon:Solyc02g090890.2.1.13	SL2.50ch02:52370511..52370565	55	-	n/a
exon	exon:Solyc02g090890.2.1.14	SL2.50ch02:52370332..52370420	89	-	1
exon	exon:Solyc02g090890.2.1.15	SL2.50ch02:52370156..52370240	85	-	n/a
exon	exon:Solyc02g090890.2.1.16	SL2.50ch02:52369708..52370078	371	-	n/a
exon	exon:Solyc02g090890.2.1.2	SL2.50ch02:52373957..52374119	163	-	n/a
exon	exon:Solyc02g090890.2.1.3	SL2.50ch02:52373729..52373803	75	-	n/a
exon	exon:Solyc02g090890.2.1.4	SL2.50ch02:52373459..52373559	101	-	1
exon	exon:Solyc02g090890.2.1.5	SL2.50ch02:52373228..52373343	116	-	2
exon	exon:Solyc02g090890.2.1.6	SL2.50ch02:52372429..52372640	212	-	n/a
exon	exon:Solyc02g090890.2.1.7	SL2.50ch02:52372184..52372275	92	-	1
exon	exon:Solyc02g090890.2.1.8	SL2.50ch02:52371852..52371966	115	-	n/a
exon	exon:Solyc02g090890.2.1.9	SL2.50ch02:52371647..52371750	104	-	1
intron	intron:Solyc02g090890.2.1.10	SL2.50ch02:52371288..52371646	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.11	SL2.50ch02:52371132..52371241	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.12	SL2.50ch02:52370968..52371066	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.13	SL2.50ch02:52370566..52370880	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.14	SL2.50ch02:52370421..52370510	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.15	SL2.50ch02:52370241..52370331	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.16	SL2.50ch02:52370079..52370155	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.2	SL2.50ch02:52374120..52374557	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.3	SL2.50ch02:52373804..52373956	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.4	SL2.50ch02:52373560..52373728	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.5	SL2.50ch02:52373344..52373458	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.6	SL2.50ch02:52372641..52373227	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.7	SL2.50ch02:52372276..52372428	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.8	SL2.50ch02:52371967..52372183	n/a	-	n/a
intron	intron:Solyc02g090890.2.1.9	SL2.50ch02:52371751..52371851	n/a	-	n/a

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Related views

Genetic loci

Tomato locus zep (zeaxanthin epoxidase)

http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17743310%2Fdetails feature 17743310

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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