Solanum lycopersicum mRNA Solyc02g090890.2.1
 mRNA details
|
| Name | Type |
Length
2,527
|
Organism |
|
Description
Zeaxanthin epoxidase, chloroplastic
|
|
Location(s)
SL2.50ch02:52369708..52375308
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0005515
- GO:0016020
- GO:0008152
- GO:0055114
- Length
- 5601
- Nb exon
- 16
- Sifter term
- GO:0009540
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc02g090890.2.1 Zeaxanthin epoxidase, chloroplastic
TAATTAACAACTCCCATATATCATCTAACTTCTTCTTTTCACTGAATCATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTGGTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAGGTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAGGTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGGGTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACGGTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAGGATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAGCTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCATTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGGGGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAAGCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGAGTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGGGTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAGGTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGATAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAGGCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTATATACAATTATAGTCTAGATCTACTTCATAAATATTTTCGTATGACAAGTCTTCAATTTCAAA
TAATTAACAACTCCCATATATCATCTAACTTCTTCTTTTCACTGAATCATATATTACTTGTTTGGATATCAATCTTCCTTGCCCCACCACCATCCTCACTTTAACCCACAAATCCCACTTTCTTTGGCCTAATTAACAATTTTTTCAATAAATCTTCTTTTCACTGAATCATACATACATTGGAAGAAAAACTCAAATCTTCTTTTCTTGAACTGGGGTTCAATTAAAAGATGTATTCAACTGTTTTTTACACTTCAGTGCATCCTTCCACTTCAGTTTTATCAAGAAAGCAGCTACCTTTATTGATTTCCAAGGACTTTTCTGCAGAGTTATATCATTCTTTACCTTGTAGGAGCTTGGAAAATGGGCATATCAACAAGGTTAAAGGAGTAAAAGTAAAAGCAACAATTGCTGAAGCTCCAGTTACTCCTACAGAGAAGACTGACTCTGGGGCTAACGGTGATTTGAAGGTTCCACAGAAGAAGTTGAAAGTACTTGTTGCGGGTGGTGGGATTGGTGGGTTAGTGTTTGCTTTGGCAGCAAAGAAAAGGGGGTTTGATGTATTGGTGTTTGAGAGGGATTTAAGTGCTATCAGAGGAGAGGGACAATATAGAGGTCCAATACAGATACAGAGCAATGCATTGGCTGCTTTAGAAGCAATTGATTTGGATGTTGCTGAAGACATTATGAATGCTGGCTGCATCACTGGTCAAAGGATTAATGGCTTGGTTGATGGTATTTCTGGCAACTGGTATTGCAAGTTTGATACGTTCACTCCAGCAGTGGAACGTGGACTTCCAGTGACAAGAGTTATCAGTCGCATGACTTTGCAGCAGATCCTTGCACGTGCTGTTGGTGAGGAGATAATTATGAATGAAAGTAATGTTGTAGACTTTGAGGATGATGGAGAGAAGGTTACTGTGGTTCTTGAGAATGGACAACGATTTACAGGTGATCTTCTGGTTGGTGCTGATGGCATAAGATCTAAGGTACGGACTAATTTATTCGGACCCAGTGAAGCTACTTACTCTGGCTACACTTGTTATACTGGAATTGCAGATTTCGTTCCAGCTGATATTGATACAGTTGGGTACCGCGTCTTTTTGGGCCACAAACAGTACTTTGTTTCTTCAGATGTGGGGGGAGGCAAGATGCAGTGGTATGCATTTTACAATGAACCAGCTGGTGGTGCGGATGCCCCAAACGGTAAAAAGGAAAGATTGCTTAAAATATTTGGGGGATGGTGTGACAATGTTATAGACCTATTAGTTGCCACAGATGAAGATGCAATTCTTCGTCGTGACATCTATGATAGACCGCCAACCTTTAGTTGGGGAAGAGGTCGTGTTACATTGCTTGGGGACTCCGTCCATGCCATGCAGCCTAATTTGGGTCAAGGGGGATGCATGGCCATAGAGGATAGCTATCAACTAGCACTGGAACTTGAAAAAGCATGCAGTCGAAGTGCAGAGTCTGGAAGCCCTGTGGATATCATCTCATCTTTAAGGAGCTATGAAAGTGCTAGAAAACTTCGAGTTGGAGTCATCCATGGACTGGCTAGAATGGCTGCAATCATGGCATCTACTTACAAGGCTTATCTTGGCGTCGGACTTGGTCCACTATCATTTTTGACGCAGTATAGAATACCACATCCTGGAAGAGTTGGTGGAAGAGTTTTTATTGACTTGGGAATGCCTCTGATGTTAAGTTGGGTTCTAGGAGGCAATGGGGACAAGCTTGAAGGCAGAATAAAACATTGCAGGCTATCTGAGAAAGCAAATGACCAATTGAGAAAATGGTTTGAAGATGATGATGCTTTAGAGCGTGCTACTGATGCAGAGTGGTTACTTTTACCTGCGGGGAATGGCTCTTCTGGTTTAGAAGCTATTGTTTTAAGCAGAGATGAGGATGTCCCTTGCACTGTCGGGTCCATCTCACATACAAATATTCCTGGAAAATCAATAGTTTTACCTTTGCCACAGGTATCTGAAATGCACGCCCGGATATCATGCAAAGACGGAGCATTTTTTGTAACTGATTTACGAAGTGAACATGGTACCTGGGTTACAGATAATGAAGGCAGAAGATATCGGACGTCTCCAAACTTCCCTACACGTTTTCATCCATCAGATGTTATCGAATTTGGTTCTGATAAGGCAGCATTTCGTGTTAAAGCAATGAAATTTCCACTAAAAACTTCTGAAAGGAAGGAAGAGCGCGAAGCAGTGGAGGCAGCGTAAAGCTTGACCTGATATAAACAGGAAATTGTACAGCATTTTATAGCAAACATCAGGCGTTGAGCAATTTAAGCATAGTTAATTTTGTATACTGTAGGTTTTAGAAAAGATCCATAAACAAGACACCATGAAAGAAAATACAGAGATTCTCCTAAAGAAATCTGGAGAATGTCATGGACATTGTCTCTTATTCTACCATTGCTAAAAATATATTACTTCTCTATGTATATACAATTATAGTCTAGATCTACTTCATAAATATTTTCGTATGACAAGTCTTCAATTTCAAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc02g090890.2.1 | SL2.50ch02:52369994..52375078 | 670 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc02g090890.2 | SL2.50ch02:52369708..52375308 | 5,601 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc02g090890.2.1.1 | SL2.50ch02:52374558..52375308 | 751 | - | 1 |
| exon | exon:Solyc02g090890.2.1.10 | SL2.50ch02:52371242..52371287 | 46 | - | n/a |
| exon | exon:Solyc02g090890.2.1.11 | SL2.50ch02:52371067..52371131 | 65 | - | 1 |
| exon | exon:Solyc02g090890.2.1.12 | SL2.50ch02:52370881..52370967 | 87 | - | 1 |
| exon | exon:Solyc02g090890.2.1.13 | SL2.50ch02:52370511..52370565 | 55 | - | n/a |
| exon | exon:Solyc02g090890.2.1.14 | SL2.50ch02:52370332..52370420 | 89 | - | 1 |
| exon | exon:Solyc02g090890.2.1.15 | SL2.50ch02:52370156..52370240 | 85 | - | n/a |
| exon | exon:Solyc02g090890.2.1.16 | SL2.50ch02:52369708..52370078 | 371 | - | n/a |
| exon | exon:Solyc02g090890.2.1.2 | SL2.50ch02:52373957..52374119 | 163 | - | n/a |
| exon | exon:Solyc02g090890.2.1.3 | SL2.50ch02:52373729..52373803 | 75 | - | n/a |
| exon | exon:Solyc02g090890.2.1.4 | SL2.50ch02:52373459..52373559 | 101 | - | 1 |
| exon | exon:Solyc02g090890.2.1.5 | SL2.50ch02:52373228..52373343 | 116 | - | 2 |
| exon | exon:Solyc02g090890.2.1.6 | SL2.50ch02:52372429..52372640 | 212 | - | n/a |
| exon | exon:Solyc02g090890.2.1.7 | SL2.50ch02:52372184..52372275 | 92 | - | 1 |
| exon | exon:Solyc02g090890.2.1.8 | SL2.50ch02:52371852..52371966 | 115 | - | n/a |
| exon | exon:Solyc02g090890.2.1.9 | SL2.50ch02:52371647..52371750 | 104 | - | 1 |
| intron | intron:Solyc02g090890.2.1.10 | SL2.50ch02:52371288..52371646 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.11 | SL2.50ch02:52371132..52371241 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.12 | SL2.50ch02:52370968..52371066 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.13 | SL2.50ch02:52370566..52370880 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.14 | SL2.50ch02:52370421..52370510 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.15 | SL2.50ch02:52370241..52370331 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.16 | SL2.50ch02:52370079..52370155 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.2 | SL2.50ch02:52374120..52374557 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.3 | SL2.50ch02:52373804..52373956 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.4 | SL2.50ch02:52373560..52373728 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.5 | SL2.50ch02:52373344..52373458 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.6 | SL2.50ch02:52372641..52373227 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.7 | SL2.50ch02:52372276..52372428 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.8 | SL2.50ch02:52371967..52372183 | n/a | - | n/a |
| intron | intron:Solyc02g090890.2.1.9 | SL2.50ch02:52371751..52371851 | n/a | - | n/a |
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