Clone hba-107m13

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Clone
Clone name
hba-107m13
LE_HBa0107M13
C04HBa0107M13
P107M13
Clone type
BAC
Contamination
none
Estimated length
100,919
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
Tomato FPC (AGI 2005)
ctg850 : [coherent], 10 members:
LE_HBa0005K05, LE_HBa0018L04, LE_HBa0024J23, LE_HBa0038E17, LE_HBa0051N16, LE_HBa0068D20, C04HBa0107M13, LE_HBa0204I04, LE_HBa0251A08, LE_HBa0291H22
Marker matches - overgo what's this? 
Plausible matches
ProbeMapPlateWell
T1317Tomato-EXPEN 2000plate 7B9
 Additional Info
Overgo Plating Progress Report
Conflicted matches
None
  
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches) 
View on physical map chromosome 4
FISH mapNot on FISH map
FISH imagesNone
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 4 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 4
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
not recorded
Full Sequence
116,553 bp
C04HBa0107M13.1
CU210888.2 (GenBank) 		[View]
End Sequences
Warnings
none
FTP
Chromosome 4 Sequencing repository (FTP)
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (23)
1746, 1854, 2002, 2073, 2138, 2198, 2397, 2509, 2650, 3025, 3241, 3481, 4006, 4205, 4328, 4777, 5549, 6398, 6584, 6584, 7461, 9241, 12472
HindIII in silico (30)
1002, 1021, 1039, 1142, 1244, 1289, 1737, 1828, 1990, 2061, 2146, 2227, 2420, 2530, 2675, 3030, 3225, 3495, 4063, 4227, 4342, 4662, 5255, 6271, 6537, 6558, 6564, 7413, 9235, 12326
Fragment Lengths Match Score
0.84
Annotations  
Browse
LE_HBa0107M13 has no browsable sequence annotations
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temporarily unavailable
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 More Criteria

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 and  bp
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e.g. AP009318.1 or AP009318
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Annotations
End Sequences

e.g. crystallin
Overgo match to marker what's this?
Map
Map position
 and  cM
Chromosome / Linkage Group
  
IL Bin Mapping
Assigned to project
Mapped to chr
Mapped to bin
  
 Verification

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