Clone hba-122c10

Clone and library  
Clone
Clone name
hba-122c10
LE_HBa0122C10
C00HBa0122C10
P122C10
Clone type
BAC
Contamination
none
Estimated length
157,576
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this?None
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches)Not on Physical Map
FISH mapNot on FISH map
FISH imagesNone
IL Mapping 
Assigned to project
Korea
IL-mapped to chromosome
-
IL-mapped to IL segment
-
IL mapping notes
-
Sequencing  
This clone is registered to be sequenced, but has not been successfully mapped to any chromosome.

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Sequencing Project
Chromosome unmapped
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
Korea Research Institute of Bioscience and Biotechnology
Full Sequence
172,179 bp
C00HBa0122C10.1
AC215387.2 (GenBank) 		[View]
End Sequences
Warnings
none
FTP
Unmapped Clones Sequencing repository (FTP)
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Restriction Fragments
HindIII in vitro (29)
1497, 1497, 1871, 2081, 2141, 2483, 2722, 2909, 2968, 3298, 3508, 3592, 3923, 4690, 5166, 5233, 5635, 5923, 5971, 6177, 6970, 8292, 8523, 8643, 9286, 9596, 10333, 11324, 11324
HindIII in silico (40)
1025, 1078, 1101, 1146, 1251, 1432, 1493, 1497, 1500, 1500, 1500, 1501, 1856, 1863, 1977, 2055, 2152, 2498, 2731, 2900, 2942, 3305, 3504, 3633, 3948, 4586, 4918, 5299, 5583, 5682, 5955, 6942, 8170, 8376, 8649, 9188, 9648, 10102, 10827, 11114
Fragment Lengths Match Score
0.84
Annotations  
Browse
LE_HBa0122C10 has no browsable sequence annotations
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Seq. Center Reported Status
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 and  bp
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Annotations
End Sequences

e.g. crystallin
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Map
Map position
 and  cM
Chromosome / Linkage Group
  
IL Bin Mapping
Assigned to project
Mapped to chr
Mapped to bin
  
 Verification

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