Clone Read LE_HBa0144C08_T7_100335

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0144C08_T7_100335
Primer
T7
ID from Seq. Facility
LE_HBa_144_C08-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1170 raw
Sequence
>LE_HBa0144C08_T7_100335 (raw untrimmed)
TGTATTCCGTCTGATGACGATTNCGGGATCCGCTGCTATCTGTGAGAGTCGGATCTCTCTTCATCTCGGTGGCGAGCGCTCTCTCATGTNTGTTATAATT
AGGCTAGTTGGACTGCTCCGGAGCACGCGAGGAGNGAGGGTCAATCCAATACGACAACTGCGTGCGTGCGGCTCAGATATCGGCTCCGCGTCCGTAGATA
AATCGATATGGGGACTATTTTCTTCTACATAATCGATACTGTAATATGACGCTCATTACGCTCANCAGCGCGCTACTACACGCATAGAGGTCGATCACGA
GATTTACAGTCGTCGAGACGATACCGCTCCCTNCTGTNGTACCTCGACACGGGGTGCGAGACCGCGAGATGGGGTGTCGTGCTTACGTCACGAACCGCCT
TAGGTGCGTAGCTCGCGTGTAGTCGTAGTGGGGCTTGCTGTCGCATCAAGCAGTGGNGGCGTNGTTGGCGCTCTTGNGTGTACGTCGCATGTGACGGTAA
TCTGTTACTGCGACGATGNAGAGCAATACAACTCTCGCTNCNANGCGCGAGAACAGATCGACTACGTNGCGTCGTTTGCCTGTCCTCGTCAGTNACCGAC
GATGTGCGCCATCAGAGTAATATTTNATTCGTCGTTTTGGCACTCGCACCCCCACTCGTACATTTGCATATCTAGCAGCAGCTCTTTAAATATAGTGTAT
GGGTACTATCTATGATGTCGTTACGTCTTCTGTGTGTGTGTTACTATATACTTGTTGTGTGAGTTCNGTGTCTGTCCGTTCGCCGACACTGCTGTTCTTC
GAGTCATTGGACTGTTGTATACTGGTATTATCTTATGTGGGTTATCGGATGCNGGAACTGCGACGCAGCTTCACGCCTCGCGACGATTCGCTANCTCTTC
ACGTATCTGCTTATANATGCACTTGAGACAATCNCGACTCGCGTAACNAGCACACTGAGGANATAATGACATGAGTCGTCGTGTGTCCCTGTCTGATCTG
TTCTATGCNTGTGCGGCTATGTCGTNGTAGGTCTTGTCGGCGTCTATGCTTATCTTTCTCTGCGTACTATTCTTGTTACTCTATTTCTGTCTCTTGCATG
ACTCTTTATATATGAATCTCTCATCACGTTGAGTCGTCCTGATGATAGTAGTGATCGCGCGCGGTATGCT
>LE_HBa0144C08_T7_100335 (trimmed for quality and cloning vector)
T

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0144C08
Clone
Clone name
hba-144c8
LE_HBa0144C08
P144C08
Clone type
BAC
Contamination
none
Estimated length
118,210
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found