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Clone Read LE_HBa0156M20_T7_102375

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0156M20_T7_102375
Primer
T7
ID from Seq. Facility
LE_HBa_156_M20-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1413 raw
Sequence
>LE_HBa0156M20_T7_102375 (raw untrimmed)
GCATCGCATTAGGACGAGTTGCTAGTGTTGNTATGATAGAGAGGGAGTCGGNCGACGTATGTGGTAGATAGTGCGCAGATGCCTGTTGTCAGTACTGTCC
TCCAGANAGATGTCTGCACTATGAAGATNGTATGTCTAGCATATCTAGTGTNTGATTAGCGTGCTGGTACTCTGACAGAGTATCTTAGCTCGTGTCTCTC
GCGATCTCACCTCAAATACTCTCATCTGCTGAGCACTTGATGGATAGCCGTGCGTACTACTGTCACACGATNCACGAGCCAGCGAGTCTGAGTNGANGAT
CTAGACGTGNCGCAGCTTCGACGTGTTGAGTGCGCNACACGCGCGCTGGCCGTAGCGGAAGATGTGATATACAAGATAGCGAGGTGTAGACGTAGTGACG
CGTAGCGNTNGCATCGANAGAAGGCTTGTGCCTGGACTTAGCGNCGCCGACGTNCTCTATACANCNGCCNTTGCAGCACTACTACAGTCACGTGCTGATA
TATGAGAGACAGCNACGAGACTANGATGATTNTCACACATGTGATGCNGNGCATGTNAGCANGAGTNGCGAGCAATACGCTTCGGTATGCGACAGCGATG
AGTGATTGCGNCNGCTCGCTCTGAGCNGTATCTCGTACTCGATAGCGTGTCACGTGATGATCATGCGACTCGCACTGCGTGATAGTCGCGACGACGGAGG
AGATCAGGCTACGCAGAGTCGATNCTCGTNACGTCGGNACCATCTCGCGCGCTGANGNATCGNCGACGCTGCTGGNACANAGCGCTCTCGTGNCTACATT
GAGTGNGNCNATGTACGCAACGNCNACACCTGTAGAGTGCNANCNGCGAGCCTATGTTCGTGCATCCATCACATCGNACGCNGCTTAGTCTGCNCATAGG
TAGCTGNATCATANGAGAGACATGATCTTGTCACGCATACCATACTCGTGACCTGTAGCATANCGAGCGATGATACCACGTGAGCTATCGTGGCACTATG
ACGTACGTATGCCTGAGCATCTGTACGACTCATACNCGACTCGACGACGATACGCTAAGCTCGTAACTANCAATGACCTATACGTTCTTGNANCTATCAT
ACGANCATACATGACAGAGATAGACTGCATGACTCGTGCGAACAGAGACACATGAGATAGCATGCCGACTGANAGGTCTGAGAGANGAAGATGAACATAG
AGCGAGTAGAAGTANGATGCGANAAGGCGATATNGATGGCGCGATATGTTTCGTGCTGCACGTGCAGGTAGCGTGCGTACTGTGCTGACATGAGTGATCC
GTCGCTTGATGCAGTTTGATGATGTCAGTATCGTATANCTGACNGAGCTGTATTATAGTCTTCGCATCATCACTGACANCTNCTCGNACGCCGCGCTTNT
CCCAGCTCGTGCT
>LE_HBa0156M20_T7_102375 (trimmed for quality and cloning vector)
G

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0156M20
Clone
Clone name
hba-156m20
LE_HBa0156M20
C08HBa0156M20
P156M20
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found