Clone Read LE_HBa0158J17_T7_102993

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0158J17_T7_102993
Primer
T7
ID from Seq. Facility
LE_HBa_158_J17-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
297 trimmed for vector and quality, 936 raw
Sequence
>LE_HBa0158J17_T7_102993 (raw untrimmed)
CGATCCCTCGGACCCGGGAGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCTAGCATATGAGGTGCTATCAAACATTTAAGGTCNCNGCNAATNNAC
NANGNCGANGCGAGGAACCCTTTCGAGAGGNNNGNANAAGACCGCCGAGAGGNCAAGNGCANCAGGGNACNNCNAGGGGGNGCNCCCCGGNCGNGACACN
ANNGCGAGNGGNNCNACGGNGAGCGCACANAGAAAGAGAGCGCAGAGAAGNNGGAGAAAANCNCGCGCAACAAGAAGGCGGGGAGCACGAGGAANNCGGA
CACNNGGAGAAACACCGNACAGCGCAAGCCACCCACAAGCCCGCCGGAGAGCAGAGNCGNGAAGAAACGGCACAAACGAAAACAGANCGCGGGCCGGCAC
CGAAACACGACCCAAGAGGCGCAGAGAAGGCAAACGCGGGGAAGCAGCCAAACAAACCACCACCGCCCGCAGAAGACCACGACCACCAAGAGCACGCGAA
GCCGCGCGAACGAGCGAGCCCGAGCGCGGGCGACCCCACCCGCGGCGGGCCGCACACGGGGGAACAGGCGCCAAAGAGCCAGAAACAAACCAAAACCGCC
CCGGCAACCCACCAACCAAACCGAGACCCCACAGCCAACAAAGCGAAGCGACACACACGCACCAACAGAACCCCCGCAGGCACACCCCGACACCACCACA
CCCAACCCACAAACCGACCCCCAACGGCGCGGCCAGGGCGCCACAACACAGCGGCCCCAGGAGCCGCGGAACCGGGAAACCGCCCACGCACCCACAACGA
CACAAACCAACAACCACCCCCAACCCCACCCCACAGGGAAAACCCCCGCCACGCCGACGCCCAGCACCACCACCCCGGCACCACCACCAAACGACGCCAG
GAAAGGCACGAGCCAGAGGGCCAGAACGAGAGACGG
>LE_HBa0158J17_T7_102993 (trimmed for quality and cloning vector)
AGCTTCTAGCATATGAGGTGCTATCAAACATTTAAGGTCNCNGCNAATNNACNANGNCGANGCGAGGAACCCTTTCGAGAGGNNNGNANAAGACCGCCGA
GAGGNCAAGNGCANCAGGGNACNNCNAGGGGGNGCNCCCCGGNCGNGACACNANNGCGAGNGGNNCNACGGNGAGCGCACANAGAAAGAGAGCGCAGAGA
AGNNGGAGAAAANCNCGCGCAACAAGAAGGCGGGGAGCACGAGGAANNCGGACACNNGGAGAAACACCGNACAGCGCAAGCCACCCACAAGCCCGCC

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
1.05522
Expected error %
27.5899
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0158J17
Clone
Clone name
hba-158j17
LE_HBa0158J17
P158J17
Clone type
BAC
Contamination
none
Estimated length
94,720
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found