Clone Read LE_HBa0162O13_T7_103993

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0162O13_T7_103993
Primer
T7
ID from Seq. Facility
LE_HBa_162_O13-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
28 trimmed for vector and quality, 882 raw
Sequence
>LE_HBa0162O13_T7_103993 (raw untrimmed)
TGTGGCAACCGGGTCCCGGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTAGACTCCCCCCCCCCTCCCCACCCCCTTTTAGGGGGTAGTTTGG
TGAATGAATGGTATAGGGGGGCCCCTTTAAAGGGTGCTGCACTTGGGCGGGGTCAACATATCCACGCAGTGTAGCAAGCGAGGAGTGTAAAGGTAGTCCC
AATGACAGTCGGTTTCATTTCTATGACTCATAGTGTTCGGCGGCAACTTCAGCTATATAGTCCCCCGCTTGTCCCTCTCGACCCCTTTCTCCCTCTCCTT
GTTATTCTTTCCTATCTGTTTTCCTTTTTATTCCTCTGCTCTCCGTTAGTGCTTCGGAACCTCCCACCCTCATCCTCCCTTGCGTCCAGCCATTGCTTTC
GCTCTCCCTCCCTCCACCCCCCCCATTTCTGTTCTCCTCCGCGCGCCCCGGCCGAGGCTCAATCGTTGTCTGTCCTCGCTTATTCTACACACTGCGCGCC
GCCATCCTCCTTCGGAGACTCGATATTGATCTCCCATCCACGAGATCTTGAGTCCCCCTCCGCGCGGCGCACCCTGGACCGCTGCTGCGCACCCTTCCTG
CCATAGCTTGGCTCCGCCCCCACATGCATGCCGTTCCCCTTCCCCCGCCCCGCACCCGCCCGTATCTCCTCAGTCTCAGCGTCACTGCGCATGATCCACC
AGCTCGCGGGACTACCCGGATTTGCACCCGACCACTCTAACCTCTTTTACCTAGTGCGTGTCTTCTGTGTCTCTCTTCTTACTTCTCCCTTGGTTCTATT
CTCTCCTCTCTCACCCCCTTACTTAGCGTTCTGTACTCCCCTAGATCGTTCATCCTCGTGTTTCATTAGCCGAGTAATTCCG
>LE_HBa0162O13_T7_103993 (trimmed for quality and cloning vector)
AGCTTAGACTCCCCCCCCCCTCCCCACC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
not recorded
Expected error %
0.0719395
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0162O13
Clone
Clone name
hba-162o13
LE_HBa0162O13
P162O13
Clone type
BAC
Contamination
none
Estimated length
72,249
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found