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Clone Read LE_HBa0172C19_SP6_104196

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0172C19_SP6_104196
Primer
SP6
ID from Seq. Facility
LE_HBa_172_C19-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
587 trimmed for vector and quality, 945 raw
Genbank Accession
Sequence
>LE_HBa0172C19_SP6_104196 (raw untrimmed)
GGGGGTGTATTTAACATTGAGCTCTAATGTCTAAGAATCATAAATTAAAATTAATTTTGTTTTTTTTTAGTTCTCATTTCGACGTGTAAAATATTCAACT
AGTTGGCAGTCATTAATTTGCTCACTAATACACGTTGGAGCGTTTGTCTTTCACGCTCTTTGTCTGTAACAATCACGTGTTTATTTATTTAAACGTAGGA
TAGTTAAAGTGTTTATTTGTGCACTATGAAAGTCGGAGGTCAAAGTTAAATTTGAAGTTAAGTTTAGGGTCCAATATACGTATTATGCCATTTAATAAAG
TCAAAGATAACACCCCTATTATTGATTACTCCTTTCGTTTAAAAAAAGACTGATCTAGTTTGACTTAACATTAAATTTATAAAAATGAAGAGACTTTTAT
ATCGTGTGATCATAAAATAAAATAATATCATATATATAAAATTACATTTTAATTTCGTGATGTTAAAAATGCTACGTGAAAATATGAAAGTAAAAAAAAA
TAACACTTGTTGAAACAAATTAGAAAAAGTCATTTTAATTAAAAGAATGAAAATATTTCTTAATGAACAACTATAGTTAGTAATGATATCATTCCAAGTG
TACTCGAAAGTCATAAATTCTAATAATTAAGTTAGGTGGGCGATCTACTCTGGTGTAGTCATCTACTATATTATAACTTAAGACACTGTCCAGATAAAAA
CAAACATAATGAGGATGCGCTTAATCCCACATCTGAACTCATCTATCAAACCTACCTACACCTCAACCAAAACTCTATTTTCTCTCCCACTCTCTCTTTC
TTCTAACTCCTCCCTATTAGTTATAGACACTCTTTCCAACTTCCTCTCCTATTATACTCCTCTTCTTACTCGTGATTCCTTCTTTTCTTCTGTTTCGTGG
CTTTCCAATTTCGGACCAACTACAATATCGGTTAAAATGCAATCT
>LE_HBa0172C19_SP6_104196 (trimmed for quality and cloning vector)
TCATAAATTAAAATTAATTTTGTTTTTTTTTAGTTCTCATTTCGACGTGTAAAATATTCAACTAGTTGGCAGTCATTAATTTGCTCACTAATACACGTTG
GAGCGTTTGTCTTTCACGCTCTTTGTCTGTAACAATCACGTGTTTATTTATTTAAACGTAGGATAGTTAAAGTGTTTATTTGTGCACTATGAAAGTCGGA
GGTCAAAGTTAAATTTGAAGTTAAGTTTAGGGTCCAATATACGTATTATGCCATTTAATAAAGTCAAAGATAACACCCCTATTATTGATTACTCCTTTCG
TTTAAAAAAAGACTGATCTAGTTTGACTTAACATTAAATTTATAAAAATGAAGAGACTTTTATATCGTGTGATCATAAAATAAAATAATATCATATATAT
AAAATTACATTTTAATTTCGTGATGTTAAAAATGCTACGTGAAAATATGAAAGTAAAAAAAAATAACACTTGTTGAAACAAATTAGAAAAAGTCATTTTA
ATTAAAAGAATGAAAATATTTCTTAATGAACAACTATAGTTAGTAATGATATCATTCCAAGTGTACTCGAAAGTCATAAATTCTAAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.900189
Expected error %
0.334353
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0172C19
Clone
Clone name
hba-172c19
LE_HBa0172C19
C08HBa0172C19
P172C19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found