Clone Read LE_HBa0172P19_SP6_104820

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0172P19_SP6_104820
Primer
SP6
ID from Seq. Facility
LE_HBa_172_P19-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
666 trimmed for vector and quality, 992 raw
Genbank Accession
Sequence
>LE_HBa0172P19_SP6_104820 (raw untrimmed)
GGGAGTTATGTCTTGAAGAATATATAAAAGTTCTACAAAATTATATATTAATTTAGCCAAACTAACATGTTTATATAGTATTATTTCCATATTACTAGAA
ATTTAGGAGTATCTAGGAGAATAAAGTAAAGAGCCCAAAATCTTTATTTTAGCAGATTTAATGGGCTAAAAACTTTTAGTTTAATTATAGGTCAGGTGGA
AAAGACAGCGTAGTACTACTATTTTTGAGAGAACTCAAAAAGTAGAAAACAGAAATTCATTTCCAATACCTACTTACTTTTCCCATGCACCAATATAATC
CCAATGGGTATAAGAGTGTTGACACAAAATAAAATTCAAAGCAAGCATTCATGCATGTATTTTGGGTTTGAATTCTTTGAAACAAAGTCAAACAACAACA
TAAATATCGAAATATTGGGTTTTATTTGCCCTGATTTCTTACCATAAATAGGTTTTCCTTTTAGGAAAAGGTTTTGAATTGAATATTCTTTTTTTGGTAG
GAAAAGGTTTAGGACTCTATAAATAGAGGCATATTCCTTCTAACTTAATTAGCATTCACAATGTAGTTTTAAGGGCTTTGAGAGTTTTGGTTAGAGGGAG
AATTTGTGAACCTCTCATGTATTCCGAGTGAATTGGTTGAGGTTGTTTCCCTCTGTATTTTGTACTCTCATGTTTATAGTGGATTGCTCATCTCCTTTGT
GGACGTAAGTCGATTGACCGAACCACGTTAAATCTTTGTGTCTTTTGTGATTGGTTTATCATTGCCCTGATAAGTTGTTTTGATGAATTACCTGCGGCCT
TACTATATAATGCTTGGGGTTGTTTTGCTCTCCTGGGTCAAACCAGAAGGGAAAGATAATTTGGGATCCTCCCTTGTTTCTGGCCAAACATCGTGTAAGG
GCTGGATCCCCAAAAAGGGGGATGGGACTTGGTTTTGTTTTTGTCTTTTATGATGGATGAATTTCGAAATTGGTGTGGCATTGGGAAAATTC
>LE_HBa0172P19_SP6_104820 (trimmed for quality and cloning vector)
TATATAAAAGTTCTACAAAATTATATATTAATTTAGCCAAACTAACATGTTTATATAGTATTATTTCCATATTACTAGAAATTTAGGAGTATCTAGGAGA
ATAAAGTAAAGAGCCCAAAATCTTTATTTTAGCAGATTTAATGGGCTAAAAACTTTTAGTTTAATTATAGGTCAGGTGGAAAAGACAGCGTAGTACTACT
ATTTTTGAGAGAACTCAAAAAGTAGAAAACAGAAATTCATTTCCAATACCTACTTACTTTTCCCATGCACCAATATAATCCCAATGGGTATAAGAGTGTT
GACACAAAATAAAATTCAAAGCAAGCATTCATGCATGTATTTTGGGTTTGAATTCTTTGAAACAAAGTCAAACAACAACATAAATATCGAAATATTGGGT
TTTATTTGCCCTGATTTCTTACCATAAATAGGTTTTCCTTTTAGGAAAAGGTTTTGAATTGAATATTCTTTTTTTGGTAGGAAAAGGTTTAGGACTCTAT
AAATAGAGGCATATTCCTTCTAACTTAATTAGCATTCACAATGTAGTTTTAAGGGCTTTGAGAGTTTTGGTTAGAGGGAGAATTTGTGAACCTCTCATGT
ATTCCGAGTGAATTGGTTGAGGTTGTTTCCCTCTGTATTTTGTACTCTCATGTTTATAGTGGATTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.926704
Expected error %
0.0271923
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0172P19
Clone
Clone name
hba-172p19
LE_HBa0172P19
C08HBa0172P19
P172P19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found