Clone Read LE_HBa0173E06_SP6_105034

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0173E06_SP6_105034
Primer
SP6
ID from Seq. Facility
LE_HBa_173_E06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
693 trimmed for vector and quality, 853 raw
Sequence
>LE_HBa0173E06_SP6_105034 (raw untrimmed)
TGGGACCCGGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGGACTGCAGAGCAAGTAGCACATCTGCTTCACTGATATTATCAGTAAACTCAA
ACGTATCGTCAATGTTAAGCTGTTTTATCCCTTGCATCACACTTGCCTCTGAGATCTACAATACCTGCTCAAATATGAGTTCCACGTAGATGTTTCCATA
TAGAAGCTGATGGAGCTTTATCGTGTTTTTTCCTCTCTTCTATTACGTTTTCTTCATAAGAATCTCTTATTCTATGCTACACTTTCCCTCATAGAAGTTA
AAAAATTTAGAGAACTAAAAGGAAAAGAGAGTGGATTAACTCAAATGCTTCATTAGATGATATAAAGTTTGAAGAGGAGGCTCTGTAATTCTAAAATGTG
TCTTTGACAAGTATTTTAATGGGTGAAATCTTAATGAGCTAAAGCATAGAAGAACATCTACTCTTTTTCCGCCTATACAAGGAGTGACAAAATTCAAGCA
TGTGATCTTTTCTTCCAGGAATATTTTTTAAAAAAAAAAAATTGCTGGGGCTTGAATTTGAATAGTCAGCCAAAAGAAAAAAATCATTCCTGCTCGATAC
TTCTACACTTCATGTTTGGGGCCACCAAGCACTTCCAGCAGAGGAAGGGGGTATGTGGGACCTTAACATGAAAAGATAGGAAAACAAGGAGACTATTAGG
ATACTGGAGAAGCATCAAATCAGGTTTATTAGATCCACAAATTGAAAGAGAACAACTTTTGCGCCAATTAAGTAACAATAGTTAACCAAATGCAGAACCA
TCTGGTACTAGGAGGGTTTTTCCTTTTTTTGGAAATTGATTTCCCTTTCGAAG
>LE_HBa0173E06_SP6_105034 (trimmed for quality and cloning vector)
AGCTTGGACTGCAGAGCAAGTAGCACATCTGCTTCACTGATATTATCAGTAAACTCAAACGTATCGTCAATGTTAAGCTGTTTTATCCCTTGCATCACAC
TTGCCTCTGAGATCTACAATACCTGCTCAAATATGAGTTCCACGTAGATGTTTCCATATAGAAGCTGATGGAGCTTTATCGTGTTTTTTCCTCTCTTCTA
TTACGTTTTCTTCATAAGAATCTCTTATTCTATGCTACACTTTCCCTCATAGAAGTTAAAAAATTTAGAGAACTAAAAGGAAAAGAGAGTGGATTAACTC
AAATGCTTCATTAGATGATATAAAGTTTGAAGAGGAGGCTCTGTAATTCTAAAATGTGTCTTTGACAAGTATTTTAATGGGTGAAATCTTAATGAGCTAA
AGCATAGAAGAACATCTACTCTTTTTCCGCCTATACAAGGAGTGACAAAATTCAAGCATGTGATCTTTTCTTCCAGGAATATTTTTTAAAAAAAAAAAAT
TGCTGGGGCTTGAATTTGAATAGTCAGCCAAAAGAAAAAAATCATTCCTGCTCGATACTTCTACACTTCATGTTTGGGGCCACCAAGCACTTCCAGCAGA
GGAAGGGGGTATGTGGGACCTTAACATGAAAAGATAGGAAAACAAGGAGACTATTAGGATACTGGAGAAGCATCAAATCAGGTTTATTAGATC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.95731
Expected error %
0.5789
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0173E06
Clone
Clone name
hba-173e6
LE_HBa0173E06
C12HBa0173E06
P173E06
Clone type
BAC
Contamination
none
Estimated length
56,798
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found