Clone Read LE_HBa0192B24_T7_107999

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0192B24_T7_107999
Primer
T7
ID from Seq. Facility
LE_HBa_192_B24-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1221 raw
Sequence
>LE_HBa0192B24_T7_107999 (raw untrimmed)
CCGGCATCCCTATGCGTATTCAATTATGAGGGGGGGGGACGAGAGAGGTATTGATCTCAGGAGGTGGGACGCATGCAAGGGCAGTGGCATAGCCTGTATA
TAAAAATGCAAGGCGGAAACGTCCCCCTTTTAAAGGGGGGCGACCGACGAGACAGGGAGCGACGAGGAGAACGTATATAGATCCGCCCTTCTAACGGGAG
GCCACTTTTTTGAGGGAGACGCCANGNGAATTAGCCGCGTCTTCTCCGCGCCATACTATATCTGCGGAGGTTGTTAGACGTGATTGCACTGATCTTTTGT
AGGTAGAGGGGATGTGCATTTTTCTAACTTTCGAAGTCGGTCTAGACATGCATGAGGCTTAAAAGTGAGTCTATAATATCGACCTGTCTAAATATGACTA
GNAGTGGTGTACTAGGAGGGTAATTCTGTTGAGCTGAGCTATATGAGTTATATTGTGGAGCGCGAGAAGTGGCGCGTGTGGGCTGGGCGCGGGCCGAGGA
GCGAGGCGAGAGGAAGCAGGATTGAGGACAATGATCAATGGAGGGTGCTAAGAGCGTGAGCCAGAGAAGGTTCGATAAGAAGTGACGTCATGTGTGCTGA
TGTAGTTCTGTCTTGNAGGTGTTATGAGAAATGACTCATATGCTAGATAGTAGAGTAGGAAACAGAGGACGCTAAAAATTTGCGGGGGAGAAGGGGTGAG
GAGTCAACACGCGAGCAGGTTCCTCGCGGAGACGAGAGGCGCTAACTGTAGCTTCAACTAGTTATATGCGCTGCTTTATTATATAATGGTATACGTGGGT
ATGCCGGTCCCTGGTAGAGGCTGTTGTGGGTGTTCGGGTGAGGGGATGCGATGATATGAGAGAGGGTAATGTCGTGGGACGGTATATGTACATGCCTACG
ATGAACAGTAGTGCGTTGTATCGTGCTCGATTAGATTGAGAGAATAGTGACCGCGGATATGGCGAGATTCGACATAGAGAGGTGCTATGGAGATGTTGGT
CCAGTTGGAGACACGGCCGTTTGCCTTAACGATTATGCGTCGGTGCTGAATGGATGCTGTGTGTGTGATGGGGTAGGGATGGGTTTGGATGGGTATGAGA
CTCTGGATAACCGTCGCTGCGTGGGGCTGTGTGAGGGGACGTGGGGCAATTTGTGGAGTTTGAGTGAGTGTCGCTAGTTGCTATGAAGAGATAGCGTCAT
CTTGTCGACTGCGACTGGTCT
>LE_HBa0192B24_T7_107999 (trimmed for quality and cloning vector)
GGGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.61387
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0192B24
Clone
Clone name
hba-192b24
LE_HBa0192B24
P192B24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found