Clone Read LE_HBa0192G19_T7_108229

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0192G19_T7_108229
Primer
T7
ID from Seq. Facility
LE_HBa_192_G19-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1126 raw
Sequence
>LE_HBa0192G19_T7_108229 (raw untrimmed)
CGATGGCTAGAGTACGAGTGCACCGAGGCGGAAGTCTCCGAGAGAATCGTACCTTGCAGTCGCAGTGCAAAGCGCTCCAGACTTCAATCAATTAGTGATT
ATCCTCCTCTCTATAATCTGTGCACGTTCCACGACATGGAGTATGTTCTTCTATGATGGCTACCCCCCTTCTACAGGTCAATGGTTATGAGGTAGGGGGT
CAAGGAGACCTTATGATAAACCATGGGCCGGCTCAAGACAATGTTTTTATCTAGATGTGGCCATTGCTCTCATATTCAACGGTGTTTAATATATATTGAT
ATAATTGACACTAGATTATGGATGGATTGTGGTATACGTATCGCTTTATCTAGCGATGTACATCCTGGTTCATGTCCTTGCAACTTTCTTATCAGCTACA
TACACTCACATTGCCACTCCCCAGACATCAATGTCTCCCTGCAAACTCGGGAAGGTTGAAGGATGAAAGCGCTCTTTGTGATAGGAGGTGGTCTCGGATC
TGCACTGTAGATAACCTGCGCCATTAAGACTGATAAGGGTCATTAGAGACAGAGGATGTGAATAGAATGGAGAGAATGAGATTATGCTTGCTCTACCCAG
CCATAGTGCCGTAGCCATACTCCATGTCATCTCATCGCCGCTTCTCTCAACACGGCCTGAAGGCGATCCGCAACTACTATGCTACCGAAGGAAGCCATAT
AAATGAGCGGGGTGAAGAATCATGAAATCTATGTAGCTGAAGATTCGATAAACGTCGACTTTCGCTCTGCTACTAATGTTTTTCACGCGTCCTCCGGACA
GCATCGAATATGTGAATATCGTACCTCTCTTGTTCATATTTCTTATTTTTGAGTCTACAGGGGTATGTCTATATGATCATAGGTTACAGACAGGCGCCTG
GTAGAAGATCGGCTTGTGACTCTCTATATACCTCGGTCGGTAATTCTCTTTTGTAGGCGCCAATCGCCGTGACCCTTTCAGTTCGTTCTTCTTACCTCGA
GGCCTACTCACTATTTATATGCCTTTCTGTACTATATCAGTGAGAATCTCTGTTATGCCGCCACCACGGTGTCATCTGTCTAATAGTACGGTTGTCATGA
CAAATGTATCTATCTTTTCATTATAC
>LE_HBa0192G19_T7_108229 (trimmed for quality and cloning vector)
GA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.55195
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0192G19
Clone
Clone name
hba-192g19
LE_HBa0192G19
P192G19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found