Clone Read LE_HBa0192H18_T7_108275

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0192H18_T7_108275
Primer
T7
ID from Seq. Facility
LE_HBa_192_H18-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1231 raw
Sequence
>LE_HBa0192H18_T7_108275 (raw untrimmed)
ATGTAGCCTTGTTGCGGAGTACCGGGCGGGGGTATACCTCCATATGAGGTCTGGACTCTTGCGAGCGCTATAGCCAAGACGTNTGTACACATGCCTTCCG
AAATCACGTTATGCCCTCTTTTGTGCGCCCCTATATGATTGTAGGATGCGAANATACAGCCCNTAACTTGCACATCCCTCTAAGGGNTGCCCTCATTGTA
TGTAAGAAGCTTCTGTGGACATCATCGNACTTAGTAGATGTTTTATGAATGGTAAATTAAGAGGCGTTATCGGATAGTTAGCAATGTTTCATTGTTATTT
TTGTAGTATATATTAGTAGCTACCAAGTTTACGAAGATATAAAGCTGAAGTAGTGGGGATCGAGGGAAGTGTATTCTATATTCGTCTATACGGGCATGGC
TTTTGTTGTGTCTCTCTACGTGTTAGGGTTGGTTCGATCTGATTGTTCTATTTGTGTATGATCTCTCTGCTTTATTCTTTGAGGATATTGAGGTAGAAAG
TGAATGGAGGTATTCGTGTGATGTGGAAGTGAATGGAAGTGACAGATCGATCTGTTTGCTGATTGTCTGAAGATAGATTAACGGTGTTTGATAGGATGTA
TGTAACCAGTGGGAGTTGTCTTTTGTTTAATATACTAGTTGCCGATGGTACGATGAGTGTGGAGTGTGTGGGATTATGTCACTTGTTTGTATGATTTTTT
GTCGTATATGTGTCTATCCCTCTTAATTCCTTACAATCTCTATTCTATTTTCTTTATCATGTGATTTATATGTTTTGTTGCTATTGGTTTTAATATTTCA
TCTTTTTATATTGTAAATATATAGAATCTTTGATTATATGATAATTGTGTGATTTTACTTTTAATAAATGTATTTCTGTATGCTATATATATCTATGGTT
ATGTATTCTGATGATTTATTGTATATTCTAATTGGTATGATATAGTAATTGTTGCATATATTTGTTACATCGGTGATGTTGTATAATCCTGTGTTAGTCT
ATGAAGGCTAACTAAATAAAATTTGATTTTGAAGGATACACTCTTTGGAATATTATGTGACTTATTGTTACGTTGTTTTCATTATATTGAAATGATACAA
TGTTTATAGTGCTATTATTAAGTGAACTTACGCATTAATAAGAAGTTACTAAGTAGAAGTATATATGTGATGCAGATATGTAAATATTACATTAATGCAT
GCGATTATATGTCATATTGAGATTATGAGGA
>LE_HBa0192H18_T7_108275 (trimmed for quality and cloning vector)
TAG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.67005
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0192H18
Clone
Clone name
hba-192h18
LE_HBa0192H18
P192H18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found