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Clone Read LE_HBa0050L21_T7_10937

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0050L21_T7_10937
Primer
T7
ID from Seq. Facility
LE_HBa_050_L21-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
771 trimmed for vector and quality, 814 raw
Genbank Accession
DU029864
Sequence
>LE_HBa0050L21_T7_10937 (raw untrimmed)
TTGGGACCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTATCAACTCATTAACAAGCCTTAATGTTGTATCCTTGTTCCTGAGCATTTTC
TTCGACCATACATGCCTCAAATGGTATCATCTCCATGCTCGAATGATAACTATTATTGTAAGCAAACTCTGCTAATGGCAAGAATTGATCCCATTGACCA
CCAAAGTCAATCACACACGCCCGCAACATATCCTCAAGAACTTTGATAGTCCGTTCAGACTAAACTTTATTTTGAGGGTAAAAGGATGTACAGGGATCCA
CCCGAGTGCCTAACTCTTTCTGCGTAGATTTCTAGAAAAGACATGTAAATTGGGTGACACGATCTGAAATAATAGACATAGGAACCCCATGCAAACGAAC
TATCTCTCGAATATATATCTTGGCTAACTTCTCTGAGTTATAGGTAGTCTGAACTGGTACAAAGTGTCAAAACTTAGTCAATCTATCCACAATGAACCAT
ATAGCATCAAACTTATCCAAGGTACCTAGCAATCCTATCACAAAGTTCATAGCAATATGGTCCCACTTCCACTTAGGTATAGGCATCCTCTTTGTCACAC
CTCCAGGCTTTTTGAGTTCATACTTCACTTGCTAACAATTTAAACATCATGATACGAAATCTACTATGTCCCTCTTCATACGACACAACCAATAATGCTG
CTTTAAGTCAAGATATATCTTAGTAGACCCCGGATGAATAGAGTTCCTCGAACTATGAGCCTCCTCCATGATCAATCTAGTCAAATAACTTGTATGAGGA
ACAGATATACGACC
>LE_HBa0050L21_T7_10937 (trimmed for quality and cloning vector)
AGCTTTATCAACTCATTAACAAGCCTTAATGTTGTATCCTTGTTCCTGAGCATTTTCTTCGACCATACATGCCTCAAATGGTATCATCTCCATGCTCGAA
TGATAACTATTATTGTAAGCAAACTCTGCTAATGGCAAGAATTGATCCCATTGACCACCAAAGTCAATCACACACGCCCGCAACATATCCTCAAGAACTT
TGATAGTCCGTTCAGACTAAACTTTATTTTGAGGGTAAAAGGATGTACAGGGATCCACCCGAGTGCCTAACTCTTTCTGCGTAGATTTCTAGAAAAGACA
TGTAAATTGGGTGACACGATCTGAAATAATAGACATAGGAACCCCATGCAAACGAACTATCTCTCGAATATATATCTTGGCTAACTTCTCTGAGTTATAG
GTAGTCTGAACTGGTACAAAGTGTCAAAACTTAGTCAATCTATCCACAATGAACCATATAGCATCAAACTTATCCAAGGTACCTAGCAATCCTATCACAA
AGTTCATAGCAATATGGTCCCACTTCCACTTAGGTATAGGCATCCTCTTTGTCACACCTCCAGGCTTTTTGAGTTCATACTTCACTTGCTAACAATTTAA
ACATCATGATACGAAATCTACTATGTCCCTCTTCATACGACACAACCAATAATGCTGCTTTAAGTCAAGATATATCTTAGTAGACCCCGGATGAATAGAG
TTCCTCGAACTATGAGCCTCCTCCATGATCAATCTAGTCAAATAACTTGTATGAGGAACAGATATACGACC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.968113
Expected error %
0.103342
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38745.1| Score 318 E Value 1e-85 Identity 22.10% Align. Length 701bp (90.92%) Frame 2
putative polyprotein, 3'-partial [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT66771.1| Score 314 E Value 1e-84 Identity 21.90% Align. Length 701bp (90.92%) Frame 2
putative polyprotein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0050L21
Clone
Clone name
hba-50l21
LE_HBa0050L21
C08HBa0050L21
P050L21
Clone type
BAC
Contamination
none
Estimated length
71,016
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found