Clone Read LE_HBa0194O07_T7_110117

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0194O07_T7_110117
Primer
T7
ID from Seq. Facility
LE_HBa_194_O07-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1253 raw
Sequence
>LE_HBa0194O07_T7_110117 (raw untrimmed)
GTCTTGATACCCCACACCCCCTCTTCTATATATAGAGGGTCGATCTATTGCCTCCGCTAACTTACATATATTTGTNACANCGCANACAGTTCACGAATCA
CCCTCCTCTATNAACGAANGTAGACGTTCATCTNTCATACATATAGGAACACTAGNGTAAGTATANNGCAANCTCANTTATTGTATGTGATGTTATAAGC
ATTGGCGATCACGCTTTANGTCTCAACACCCTTCGTATGTACCCATCTACATCCTATACAGACGTACTCCAGTCTTCATACATCTTAGTACACTTAGACG
TATCTATCTCGTATTCATCTAGTGGTCTATTACTCCATTCATACTTTNAGAATTCTTATATTGTGGAATAATAATCCTTAGTNCTGTAGTAATAATAATG
TTCTCCTACATATACAGCTGTATTAGTGTACGCACTGCTATCTATGTCAACCTCTCTGATATACTACCTTATCCTATCTCGACGTTGGTTACNCATATAC
TATCGTAACTATAACATCCATTTTGCTAATATAGTNTTATCGCATAGTCCCTATTCTACATACTCACTGATTTCATATTCCTTACGTCTGAAGTTATGCA
ATTCGAGTATACAGATACATCTTTTTCTATGTATGTCTTCATTCCTAAAGTAATACTTCCTTGTATGATATGCCCATCTATAACAACCTTCGTCGATCTC
CTACAATAATAGCTACATCACGTTATTATTTCTATTCCAATAAAATATTAAGTTTGTTTGATCTCACTTCTACTCAAGGTCTATACTGCATCATAATACT
AATATAATACACAAACGACTGTCACATTTTACAACTATACAATAGGACTTTTAATTCATGTGATATTTTAGCAAAATATTTACTTTTCTTTTTATTTTTT
TTTATTCTGTTTGATTTCCTTTCTTCTTAGTCACTATCTATGCTCTTCTGTCCTCGATGTCTTCTTTGTTTTTTTTGTAGCTTTCTCGATGTTGCTGTAC
TAATATCTCTTTAATTATTATATTATCTTATCTTTATTTACTATTCTCATTGATACTTTACTGCTCTGCTTGTGTCTTTTGCTGGCCATATACTGATCTA
TCTCTGTGTTAGTTACTGATCTTACTCTTACTTACTATGTTCTACAGTATGCTAATTTTCTACAAAATATAGCGTATCTGATTGTCCTATGTTCATTGAT
GTTCTGTCTTTATCTTCTTGTTGTTATTATCTGTGTCCATCTTTCTGCTGCTT
>LE_HBa0194O07_T7_110117 (trimmed for quality and cloning vector)
TA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.66405
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0194O07
Clone
Clone name
hba-194o7
LE_HBa0194O07
P194O07
Clone type
BAC
Contamination
none
Estimated length
114,070
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found