Clone Read LE_HBa0197J12_SP6_110654

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0197J12_SP6_110654
Primer
SP6
ID from Seq. Facility
LE_HBa_197_J12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
450 trimmed for vector and quality, 777 raw
Genbank Accession
Sequence
>LE_HBa0197J12_SP6_110654 (raw untrimmed)
TTTTTGGGAATTGCTGGCTTGATCACTAATCTTCGAGTGGAGGTAGGTTATGGTTTTTACACTATTCGTAGTAAACTCTTAATAGCGAATGATATGTATT
GGGTAGTGTTGTAAACCCTTCTATATGCTTAATTGTGTGTTTGCATGTTGTGATTATATAATCGTGATGAGATAAGCATGATGAAGCTATTGAATTCTAA
ATCTTGGAAAAGAAACCCTAATCTACTTTGTTAATAATAATGCCTTAGTATACAAGAAGGCTTGATGAATGAAAGTAGTGAGATTAGGGGATCGGGTGCC
ACGTTCCGGTACCAAGATAGTATATGAGGATTGGAGTGTCACGTTCCGACACCAGGATAGCATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTAT
ATGAGGATCGGAGTATCACGTTCCGACACCAGGATAGTATATGGATCGGGTGCCACATTCCGGTACCAGGATATAATATAGATCGGGTGTCACATTCCAA
CACCAGGATAGATTGATGATCTGAGTTGCACGTACTTACATCGTGTTAGTATATGAGGAGCCGACTGTTTCATACTGTATCTGGAAGAATAACGCTCACT
CATCTTGATGGATGGTAAATAGAATATATACTATATGTATGTAATTGCCATTGGTGCTCTTAGATGCGGTGGGCAAGTGTCCCATTGATGTTCTTAATAG
GTAGATATACTGGGTATCATTTGTTTTTACCTCCTTTTCCTCCTGTGAATTTCTTCTTACACCCCTCTCTGTATCCG
>LE_HBa0197J12_SP6_110654 (trimmed for quality and cloning vector)
CTTGATCACTAATCTTCGAGTGGAGGTAGGTTATGGTTTTTACACTATTCGTAGTAAACTCTTAATAGCGAATGATATGTATTGGGTAGTGTTGTAAACC
CTTCTATATGCTTAATTGTGTGTTTGCATGTTGTGATTATATAATCGTGATGAGATAAGCATGATGAAGCTATTGAATTCTAAATCTTGGAAAAGAAACC
CTAATCTACTTTGTTAATAATAATGCCTTAGTATACAAGAAGGCTTGATGAATGAAAGTAGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAAGA
TAGTATATGAGGATTGGAGTGTCACGTTCCGACACCAGGATAGCATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTATC
ACGTTCCGACACCAGGATAGTATATGGATCGGGTGCCACATTCCGGTACC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.970792
Expected error %
0.265644
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0197J12
Clone
Clone name
hba-197j12
LE_HBa0197J12
P197J12
Clone type
BAC
Contamination
none
Estimated length
114,179
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found