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Clone Read LE_HBa0198J06_SP6_111410

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0198J06_SP6_111410
Primer
SP6
ID from Seq. Facility
LE_HBa_198_J06-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
529 trimmed for vector and quality, 805 raw
Genbank Accession
DU096623
Sequence
>LE_HBa0198J06_SP6_111410 (raw untrimmed)
GTTTTCTTGAGACATGCATGGGCCTATTTGTATGTCCAACTATCGGGCCTTGAGATCCATTTTTGAAGTTTGTTATGCTATTCTACCTGCATATTGCCTC
ATCACCAATTCCTACTTTTTACCCAAGGTAAGAATATTACATATATTGAAAATTGGTGGTATTGAACTTTTAACCCCCCCCCCCCACCCCCTCCCCGCCC
CTAACATTTAAGGTCAAAAATCGAAACTTATTAAAATTAAAGTTTTTCTTATAGGGCAAGTATGATCAAAAGTTCGAGACCACACATAACTAAATCACTT
CATATTTTTTAGGATTTTTTTTACACTACATAACATCATCATCAGAACTCGCAATAGAAATTTGAGACTCTTATCATAGCAATTACCTAACAGTAATAAT
CCATTAATGTATATGTTTGTTATATTAAAATATAATTACTATACATAATTAATGCATATTTGATTAGTGGTTGTACTTGTTTTCAATTGAAAATCCAAAT
GTTTTACAAGTCCATAAAACGTAAACTTGGTTAATATTTTCTAGCTAGCATGTACTGAAGTATATAATTACTGCTTAAACAAGGCATATTCTATTCTACC
ACATATTATTTATTGACTTTATACCAACATTGACCTCCAACTATTTATACGTCGACAGACTCATAAATCTTTACATCCTTGTGTATTTATTTTATCTTTT
CTGTAATTTTTTGATTTTTTTTTCTTTACTATCTTATTTTCCACTCTCGCAAATGAACTGAATTATAGTTTATCTCTTACTCCATTATTTGTTATATAGA
AAATC
>LE_HBa0198J06_SP6_111410 (trimmed for quality and cloning vector)
CCTATTTGTATGTCCAACTATCGGGCCTTGAGATCCATTTTTGAAGTTTGTTATGCTATTCTACCTGCATATTGCCTCATCACCAATTCCTACTTTTTAC
CCAAGGTAAGAATATTACATATATTGAAAATTGGTGGTATTGAACTTTTAACCCCCCCCCCCCACCCCCTCCCCGCCCCTAACATTTAAGGTCAAAAATC
GAAACTTATTAAAATTAAAGTTTTTCTTATAGGGCAAGTATGATCAAAAGTTCGAGACCACACATAACTAAATCACTTCATATTTTTTAGGATTTTTTTT
ACACTACATAACATCATCATCAGAACTCGCAATAGAAATTTGAGACTCTTATCATAGCAATTACCTAACAGTAATAATCCATTAATGTATATGTTTGTTA
TATTAAAATATAATTACTATACATAATTAATGCATATTTGATTAGTGGTTGTACTTGTTTTCAATTGAAAATCCAAATGTTTTACAAGTCCATAAAACGT
AAACTTGGTTAATATTTTCTAGCTAGCAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.923514
Expected error %
0.549033
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0198J06
Clone
Clone name
hba-198j6
LE_HBa0198J06
P198J06
Clone type
BAC
Contamination
none
Estimated length
123,552
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found