Clone Read LE_HBa0131C09_T7_111840

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0131C09_T7_111840
Primer
T7
ID from Seq. Facility
LE_HBa_131_C09-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
600 trimmed for vector and quality, 977 raw
Genbank Accession
DU069298
Sequence
>LE_HBa0131C09_T7_111840 (raw untrimmed)
CTAACTGGGTCCCGGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTTATTATGTTTCAGGAACGGATTTTTAATGTGGCCTACAACGTTGTCA
ATGGAGAATGCAGTCCTATTAAAGATCAATCTGCTCCAATTTATGTAACAATCGGTGATGGAGGAAATCTTGAAGGCCTAGCCACCAAGTAAGATAATCT
AAGTCTAGAAAGTTGTTTTATGTGTTGTGGTTGGCGTTTCTGTGAGACAACTCAACTAATTAGATATCTTGTAACACTAATTTCAGCATGACAGAGCCAC
AACCAGCTTACTCTGCATTCCGCGAGGCCAGTTTTGGACATGCCACTCTTGCCATCAACAATAGAACTCATGCTTATTATAGTTGGCATCGTAATCAAGA
TGGATATGCTGTGGAAGCTGATAAGATATGGGTTAACAACCGAGTTTGGCATCCAGTTGATGAGTGCACAACAGCCAAATCATGATATGTGATATACACA
AAATTTTATCCATCTTTTCTTTCCTTTTCCTCAGTAACATTGTTGTACTTGTCTACGAATAAATATTTTATTATTTCAAGCTTCTTGCTGCCTCATAATT
TTTAAAACGTCTCTTTAAGACGTGGCAGAAGAGTCAATTGTGTGGGAAAATCATTAAATCTCTTTTAATAAAAATGAAGGATATGTTTCCTCTTCTATTA
TTCTGTTTTTCCGGTCTTCTATTTCTGTTTCATAATTCACCTTATTGTATTTAATTTTTTTTACACTTAGTGTTTGAACTAATTTTTCTGTTGTTTTAAA
CCTCGCACCTTGTTTGCTAACTCGCCTTAATTCTTTTACATATATTTACGTTCTTTTCTTCATCTTCTTTATCGGTATTTCACCCACCTTTAATCTTTTA
TCTATTAAATTTCTCTCTTCCTACTCTCTTCTATTCACTCTACTGCGTTACCATGGGTGTGCCTGACTGGCGACAAT
>LE_HBa0131C09_T7_111840 (trimmed for quality and cloning vector)
AGCTTTTATTATGTTTCAGGAACGGATTTTTAATGTGGCCTACAACGTTGTCAATGGAGAATGCAGTCCTATTAAAGATCAATCTGCTCCAATTTATGTA
ACAATCGGTGATGGAGGAAATCTTGAAGGCCTAGCCACCAAGTAAGATAATCTAAGTCTAGAAAGTTGTTTTATGTGTTGTGGTTGGCGTTTCTGTGAGA
CAACTCAACTAATTAGATATCTTGTAACACTAATTTCAGCATGACAGAGCCACAACCAGCTTACTCTGCATTCCGCGAGGCCAGTTTTGGACATGCCACT
CTTGCCATCAACAATAGAACTCATGCTTATTATAGTTGGCATCGTAATCAAGATGGATATGCTGTGGAAGCTGATAAGATATGGGTTAACAACCGAGTTT
GGCATCCAGTTGATGAGTGCACAACAGCCAAATCATGATATGTGATATACACAAAATTTTATCCATCTTTTCTTTCCTTTTCCTCAGTAACATTGTTGTA
CTTGTCTACGAATAAATATTTTATTATTTCAAGCTTCTTGCTGCCTCATAATTTTTAAAACGTCTCTTTAAGACGTGGCAGAAGAGTCAATTGTGTGGGA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.971079
Expected error %
1.1856
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At2g16430.2 Score 107 E Value 9e-41 Identity 69.20% Align. Length 415bp (69.17%) Frame 3
68415.m01882 purple acid phosphatase (PAP10) identical to purple acid phosphatase (PAP10) GI:20257482 from [Arabidopsis thaliana]
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At2g16430.1 Score 107 E Value 9e-41 Identity 69.20% Align. Length 415bp (69.17%) Frame 3
68415.m01881 purple acid phosphatase (PAP10) identical to purple acid phosphatase (PAP10) GI:20257482 from [Arabidopsis thaliana]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT37527.1| Score 137 E Value 1e-49 Identity 93.90% Align. Length 415bp (69.17%) Frame 3
purple acid phosphatase 2 [Solanum tuberosum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
dbj|BAC55155.1| Score 130 E Value 7e-47 Identity 87.90% Align. Length 415bp (69.17%) Frame 3
purple acid phosphatase [Nicotiana tabacum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0131C09
Clone
Clone name
hba-131c9
LE_HBa0131C09
P131C09
Clone type
BAC
Contamination
none
Estimated length
42,479
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found