Clone Read LE_HBa0191A10_SP6_114058

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0191A10_SP6_114058
Primer
SP6
ID from Seq. Facility
LE_HBa_191_A10-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1143 raw
Sequence
>LE_HBa0191A10_SP6_114058 (raw untrimmed)
CACCACCCCGACCCTCTTCCCCACCTCTACCCCCAACCCGCGAGTACATCCAGCTTGCACGGATCGTACCGTGTATACACCTCTCCCTCTTTCACCTCCC
CTCCCTACAAGGAACGCCCCTGGCTATCACTCGAATTAGATCGCACGAGCGGGCCCCTGTATCGGATGGACTTATGTCTCGCGGATATGAACTGCGCGCT
GAAGTGTGCGGAGGTTGGCATTACGTCTCAGGGTATGNTTCCGTCTCATCTCCATAATATACAATACATCTCATCCCCACCACCCTCTTCCACACACAAC
ACTACAATCACAAAGATTGTTGAAAATGCAAACCACCTGATCACATCTACTTCTCCCTCCGCCCTGCACCCTCCCTCTATCTCCTTCCTCCCTCCACTCC
TCCCATACTATTCACCAACCCCTTCCTACCACTATGCAACCCCTTGCCCTTCTCCTCCCTGTATCCCTCCTCACCTATCCTCCACTCTTCACTCCTCACC
CCTCCACTCCACACAAGCTTTGTGGTTTTATCATTAATCTCATCTAAATAATATCATAAGCCGCACTCTTAGCTCCCACAACGCTCTCAAATCGCTTTCA
CCATATCATTCCCTTACTCTTATCTCTCTTTACTAATTCTACTTCAACCCCCCTCCATTTTCGTAATCTCATGCTACTCACTCCCTTTTAAACTATTCAA
CTGCTTCTCAACTCACAACTCATCCCCTCTGCTAAACACACCTCTCACAACAAACACCCTACTCCACTATATCACCTCTCTCTCCCATGCTTTCTCACTC
CTTATCTCCTTTCATACTTTCGTTCTATCTCATTACCTCCATTAACATAATCCTATTCTCACCCCACGACATAAACACATACTGTTCCCTCGCCACTCTC
ACTGACGTACTCTACCCAACACATCAATACGTNCTATACTATACTATATACACACACTACACCATCTAAATATACCTCTTAAATCTATTGACTCTATTAT
CTTATATATAATTCACCTATATTCCTCTGTTCACTATTGCAAGCTGATAACTCCTTCACAACCGATACGCAGAACTCTCCTCAGATAGACCCATAATATA
CTTACCTATATTGGCCATTATGGCATCAACACAATAATCTAGT
>LE_HBa0191A10_SP6_114058 (trimmed for quality and cloning vector)
TCCC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.8161
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0191A10
Clone
Clone name
hba-191a10
LE_HBa0191A10
C08HBa0191A10
P191A10
Clone type
BAC
Contamination
none
Estimated length
93,344
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found