Clone Read LE_HBa0191E09_SP6_114248

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0191E09_SP6_114248
Primer
SP6
ID from Seq. Facility
LE_HBa_191_E09-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1305 raw
Sequence
>LE_HBa0191E09_SP6_114248 (raw untrimmed)
TACTTTTCCCTCATATATTATTGTGAATATATGGGATGTGGTATGCCGACTGCAGACATAATATCGCATGCATACACACATAAGCTCGAGTATTATAGTG
AAACAGTAACATTCTCTCTGTATAGTGACTCAGGAGCTCTCTGCGTGCAGAATCTACTTAACCTACTATAATGTGCAATCACAACACGCATAACACTACT
TATGCTCGAGAAGTTAGTGGTATGAGTGTATTTTATATAATAGACAAGTATAGTATATACTATTGTTCGTCGACATCATCATATCTGCTACATTGTTACT
TATAATATGCTTTGATAGTCACTTCTATATCGCTTGGCAAGATCTTCTGTGTACTATTTTATAATGTAATGTGAATATGTATATAGCCTTCATATTACGC
ATGCGCTTGCTTCGCTATTAAATCTGACTATACGTGACTGCCCAACAACAGTGTATAATAGATCTGTAGTACTGTGCTCAGATGAGACCTTTGTGTCTCA
TAGAACTACAAATATCGTCTGCACATCATCATAAATGTGTATTATTCTGTATTATGGCTCTCTTCATGCGTGCTAAGCAATGATAATCCTTCACTTTCAT
CCCGTTCATCACTCTACCATCAATAGGGAGGACCTCAACTCTGATATAATAGTGGTTTCCTGAATGTACTATATCCTGTTTGATCTTATTCGTGCTTCCG
GGGTGTAAGCGTGTATCAGCTCGATATTATAGCCACTGCGCCGCACCACCTTCGACCTTATATCGCTATGACTCTCTTAATAATGGCTCGCTCGAATATA
TGGTGCCGATATCCAGCATTCACTCCTCTCGAGATCATCAAAACAACACTAAATGGAGCTGTAACTCTTATTCACTCTTTACTATATCTGTGTGTTCGTA
CTTCCTTTGATGCTGGTGATTGGTTGTTTGGTCTCTAATTGTGTACTTGACTATCTTACTACATTCTTCTACGAATCTCATCCACAAACTATTACTGTGT
ACTATTTACTCTATCTTTATTGTTTCTCTTCTTTATCTTATCTTTTTGTTTCTATTGTTTCTCTACTTTTCTTCATTCCTTATCTCTTATTTCCTCCTAT
CTCTCTTCTATTCTTTCTTCCTGTCTCGTCTCTGTTGTACTATATGTCCCGCTACTTGTCTGCTCTTCTATTATTCNGCTATACCTGACAGGCCTCTCTG
ATGGATGACTTCTTCGCGTCTATGAAACTGTATAATGTATGAACCATACTGCTTATCGACTGTAATATAAATGTAACTTTACTTATTCGTTTTATAGCTT
TATTA
>LE_HBa0191E09_SP6_114248 (trimmed for quality and cloning vector)
GT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.8966
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0191E09
Clone
Clone name
hba-191e9
LE_HBa0191E09
P191E09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found