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Clone Read LE_HBa0004H22_SP6_1146

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0004H22_SP6_1146
Primer
SP6
ID from Seq. Facility
LE_Hba_004_H22-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
652 trimmed for vector and quality, 1188 raw
Genbank Accession
DU021502
Sequence
>LE_HBa0004H22_SP6_1146 (raw untrimmed)
GCCATACCTTTGTTTAAGTCATATTTGCAGTGTTTACTGTAGTTTTGAAGAAGTAAAGAGGAGTGTGAGAAAGAGTATAATGGAACTATGTATTTCTCAA
TTGTTTCATGTTAGGTTATTAACATTTTAATATTAATATTTAACATATTAAATTGATTTATTTTGGAGTTATAAGAATGAACATTGGAATGGATGACTTC
TACATCATCCATTAGCATTGGTTATCCATCAATGTATTTCATTCTTAATTCCTCCATTACTCTTTGTAACCTATGTAACATATGTAACTCCCATTGTAAC
CTATGTAACCTATGTAACTCCCATTGTAACCTATGAAACTCCAAAGGTCATTATCTTCACTATTTACTACCTCCATTATCTTCCTATTCATTGCTAGGAA
GACTTCTTGTAGTATAAATAGTGGTAGTCTTCATTTGGTTTTAGAGACACACAAAACACAAGAGAAAACAAAGAGTGAAAGAGTTAGTCTAAAAGAGAGT
TATTATTAGTTGAAGGGAGGTGTTCTTTTTTGTGGAGCTTTGGACTCAACTCTTGTCCAGAGTTGTTGAGTTATACTTTGTGAAGGTTGTTGTATCTTGG
AGGGGACAAGTCAAAGAGGACTACTACTAGACCGGTGAAAACATTTGCTGCATTGGGTTTGAATCTCCTTAAAGAGAGCGAGATATCCGCGCCTCAGCCT
GAAGAGATTAATTTCTTCATTTTATTTTCAATTGTAATCTTGCAATGTTATTATCTTGTAAGTTTTTCACTAACAGTTTCAAGGAGATTCAATGATGGCT
ACAATTCAAAAAACCGTGGATGTCAAGATGGGAGATCTTAATAAGCAATTTCGGTTGCATGACAACCATTTTCAAAAGTGGAAACAGTAAGTTCTTTTCT
CCTTAAGTCTTTTCATGGTTTCTTCACTTTTAACCCAAGAAAAATCCAATTAAAAAAAACTTCTCCCCTTTTGAATGATGATAAAACTTTTTCCCATTTG
GAGAAGTGGAAAAGGGAAATGGGGATTTCCTAAAATGTCGGTTTTATCTTCTTAACTGTCTTGTCTAAAAATTTTTATGATTATAAGGAAAGAACAAACT
TCTAAAACAAAAAAAAATTTTAAAAGGCTTTTGAAAAATAATTATAAAACCCAAAAAGGGTGGGACGCAAAAAATTTGCGCGTTTTTA
>LE_HBa0004H22_SP6_1146 (trimmed for quality and cloning vector)
TTTTGAAGAAGTAAAGAGGAGTGTGAGAAAGAGTATAATGGAACTATGTATTTCTCAATTGTTTCATGTTAGGTTATTAACATTTTAATATTAATATTTA
ACATATTAAATTGATTTATTTTGGAGTTATAAGAATGAACATTGGAATGGATGACTTCTACATCATCCATTAGCATTGGTTATCCATCAATGTATTTCAT
TCTTAATTCCTCCATTACTCTTTGTAACCTATGTAACATATGTAACTCCCATTGTAACCTATGTAACCTATGTAACTCCCATTGTAACCTATGAAACTCC
AAAGGTCATTATCTTCACTATTTACTACCTCCATTATCTTCCTATTCATTGCTAGGAAGACTTCTTGTAGTATAAATAGTGGTAGTCTTCATTTGGTTTT
AGAGACACACAAAACACAAGAGAAAACAAAGAGTGAAAGAGTTAGTCTAAAAGAGAGTTATTATTAGTTGAAGGGAGGTGTTCTTTTTTGTGGAGCTTTG
GACTCAACTCTTGTCCAGAGTTGTTGAGTTATACTTTGTGAAGGTTGTTGTATCTTGGAGGGGACAAGTCAAAGAGGACTACTACTAGACCGGTGAAAAC
ATTTGCTGCATTGGGTTTGAATCTCCTTAAAGAGAGCGAGATATCCGCGCCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.949423
Expected error %
0.414638
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0004H22
Clone
Clone name
hba-4h22
LE_HBa0004H22
C12HBa0004H22
P004H22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found