Clone Read LE_HBa0054C15_SP6_12028

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0054C15_SP6_12028
Primer
SP6
ID from Seq. Facility
LE_HBa_054_C15-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
329 trimmed for vector and quality, 911 raw
Genbank Accession
DU030831
Sequence
>LE_HBa0054C15_SP6_12028 (raw untrimmed)
AAAAATTATACAATTTAATATGAATAGTGAAGTTATATGTATGAAACGTAAGGCCTACAATTGTATCTACATCTAAAGTAGATTTATTCCTCCCTATTCA
TCTTCCCTTCTTTTTNCTGGAATCTGACATTTTTCTTTCTACTGATCACTTTTATGTGATAGGGCTCTTATAGATACTCATTGTTATTGTGTAAGGTCTG
AACATGATGGTTTTATAGGTAAGGCTTGAGGTTGAGGTTCAAAGAGGAGATATTTGAGAGTTAATTTAAGATTTTCTCTATTAGGATTGTGTAATTGCTT
GAGCTGCCTAGAATTTTTGGTAAAGCTGGCATTGCAAAAAAAAATAAAAATTCTATCTGGTGATGAATACGTAGAATATTTTTACCATTAGTGTCTTTAA
GCTTCGGGTTGAGGAAAAGAAAAAATGTCATAAGCTTTCTTACTTTCTTTACTAAACAGCTGGAAGCTGATTATTTTTTATTTTTTTTTCCCCCCTNCCG
CAGTTTCATACAAAAAGAAAAGAGGGGAGAGGGGGCGTCTATATATGTTTATTCTACCTTGACTATCGTATTAATTAAGTATATCATTATTTTTTTTTTT
TATTGTTTCTCCTCCTCCTCGTCATATTGTNTTGTTGTTTTTATTTTGTTTATTTATTTGTGATTTAGNTATAATNAAAGGTTGAGNGAATGGGAGAGTA
GATTTGTTGAATAGGATGAGAGAATATAAAATATATAATTGTGATATATTGATTAAAGTNAGATTATATAATGATAATTGTATGTAATTGTATTNGTTAG
ATGGAATTTTATATTGTAGTGTTGGATAGTTGGTGTGATATATTATTGTTTTAGTTTATTGGTATATTGTTGTAATATTATATTTAAGTTNTTGAGATTG
AATAATTTAGT
>LE_HBa0054C15_SP6_12028 (trimmed for quality and cloning vector)
AATTGTATCTACATCTAAAGTAGATTTATTCCTCCCTATTCATCTTCCCTTCTTTTTNCTGGAATCTGACATTTTTCTTTCTACTGATCACTTTTATGTG
ATAGGGCTCTTATAGATACTCATTGTTATTGTGTAAGGTCTGAACATGATGGTTTTATAGGTAAGGCTTGAGGTTGAGGTTCAAAGAGGAGATATTTGAG
AGTTAATTTAAGATTTTCTCTATTAGGATTGTGTAATTGCTTGAGCTGCCTAGAATTTTTGGTAAAGCTGGCATTGCAAAAAAAAATAAAAATTCTATCT
GGTGATGAATACGTAGAATATTTTTACCA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.931584
Expected error %
1.37365
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0054C15
Clone
Clone name
hba-54c15
LE_HBa0054C15
P054C15
Clone type
BAC
Contamination
none
Estimated length
111,118
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found