Clone Read LE_HBa0054D24_SP6_12094

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0054D24_SP6_12094
Primer
SP6
ID from Seq. Facility
LE_HBa_054_D24-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
327 trimmed for vector and quality, 860 raw
Genbank Accession
DU030888
Sequence
>LE_HBa0054D24_SP6_12094 (raw untrimmed)
AGGAGGGTTGTTTTTGTTTTTTTCTTATGTGAGATATTTTCATTTGAGAAGGACTGATAGACATGCTACCAAGTATGAATGATAACAGAAGCCCTTAAAA
GCATAATACCTACTCCTGAGNATGAAGTTCGTCCCTTCATCAAACAATGACATGCTTAAAATGCTTAAATTTCTATATTATAGCAGTGTGAACCTGATTC
TAGCAACTAAAAGATGGGGCAATATGAAACTTACCTCCAGCACTTTTCCCCTGGCCTTGTGGTGCTCAGGAAGTAGACGAATTTCATCAGTTACGTTTAT
ACATTCAGCGACGTTTTCAGGGGAGATGAAGTGCAAAACAACGTTGATACATGACTGTGGACAGAGGATAGAATCTTTTGTTAGTTATCATGCTCCAACA
GATATGAAGTCACATATACAGAGTATATCCGAGACTAGAAGCGATTCTTTATATAAGATGCCCCTGTTGGGGGGCAAAGATAGGATTGTTTTTGTGCTTC
CTCCCACATACCTTAGCCTCATCTCACCAAAAAAAACAGATCAGTTAGTTTTGCACCTATCTATTACAGTCTGTTCTTTATCTTTTATACAACTATACAT
GTTCAATTGTAAGTCGATAAACATATAGGCTGGTTCTATTTATTGACCTAAGTAACTTCCGTCTTTTACTTACTGTAGTTCTTCCTTCTTTCCCCTCTCG
ATCCTTAATATCTTCTTTGTTATATCACTAGCTTATGTTTTATGTTAGCAACTTACTATTATATTCCTGGATTAAGTCGTTTTGTACCTCTTGCCTAGCT
GAATACGACAGTCCAAATCTTACTTCCCCACTGCCCTCATCCCAACTTATATCTCCACAC
>LE_HBa0054D24_SP6_12094 (trimmed for quality and cloning vector)
ATAGACATGCTACCAAGTATGAATGATAACAGAAGCCCTTAAAAGCATAATACCTACTCCTGAGNATGAAGTTCGTCCCTTCATCAAACAATGACATGCT
TAAAATGCTTAAATTTCTATATTATAGCAGTGTGAACCTGATTCTAGCAACTAAAAGATGGGGCAATATGAAACTTACCTCCAGCACTTTTCCCCTGGCC
TTGTGGTGCTCAGGAAGTAGACGAATTTCATCAGTTACGTTTATACATTCAGCGACGTTTTCAGGGGAGATGAAGTGCAAAACAACGTTGATACATGACT
GTGGACAGAGGATAGAATCTTTTGTTA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.973732
Expected error %
1.50724
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0054D24
Clone
Clone name
hba-54d24
LE_HBa0054D24
C03HBa0054D24
P054D24
Clone type
BAC
Contamination
none
Estimated length
135,182
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found