Clone Read LE_HBa0163J14_T7_123484

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0163J14_T7_123484
Primer
T7
ID from Seq. Facility
LE_HBa_163_J14-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
154 trimmed for vector and quality, 820 raw
Sequence
>LE_HBa0163J14_T7_123484 (raw untrimmed)
TCTCCGCTTGGGCCCCGGGGGGTCCTCTANGAGTCGACCTNGCAGGCATNGCAAGCTTCTCCTATTAATAGGATGCTCTCCTTTCTGCTTGCTCCAGAAT
CTCGATGCATAACCGATCCTTTGGAGCAGATTTTCCTTCCTCTGTAGACTTGGTAAAATCTACAAACCTAGTGAGCCTCTTAGCAATTTGAAGTGCTTTT
TTGCCATCGGATGTCAGATCAGAAGGTCTAGCTCCTTTGGTTAAAAGGGACACTATAATTTTAGGTTCTTTCCTCATGGAAGCAACATGAAGTACCGTGT
AGTCCTCTAGGATTTTGATGATTAACATCACCAGGTGATAGATCTAAAAGTACTGCTGTAGCGGCTGCATACACAATAGACTCCTTCATATGGTAAAGCT
CAGCGTCTATGGAACCGAGTACTCCCTCAAAAGTATTCCTCAAAATTGCTCGCGTTAGAGCCAATAGTGAAAACAAAACCAGGATGGGGTCAAGAGGAAC
ATAGTGTAAGAGAAAGAAAAAGAATACAAGATGTGAGGAGACATGAGGAAAGTAGTTACTGTTCAGTCAAGACAAGGCTAAATAATAACTAATATTCTTA
CTCATAAGAGGTGGGAAAAGCGATACAACAAATATTAGAGATTAAGCTGCAAGAGATAAGCTCAGGGCGGATTAATAAGAGGACATCTAGTTTGTCGTGC
TTGTTTAGCTAGACTAATTATTAGTTAATCACTCGAGTAAGTGATGAGCACATTCTCAGTCTAGATTGCATATCGTAACTGCGACGGATCATCTTATCTA
TCCGATGTACCGGAGAAACA
>LE_HBa0163J14_T7_123484 (trimmed for quality and cloning vector)
AGCAGATTTTCCTTCCTCTGTAGACTTGGTAAAATCTACAAACCTAGTGAGCCTCTTAGCAATTTGAAGTGCTTTTTTGCCATCGGATGTCAGATCAGAA
GGTCTAGCTCCTTTGGTTAAAAGGGACACTATAATTTTAGGTTCTTTCCTCATG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.915668
Expected error %
1.4003
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT57637.1| Score 98 E Value 8e-20 Identity 32.70% Align. Length 152bp (98.70%) Frame 2
non-inducible immunity 1 [Lycopersicon esculentum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAM62410.1| Score 92 E Value 3e-18 Identity 30.10% Align. Length 152bp (98.70%) Frame 2
NPR1 [Nicotiana tabacum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0163J14
Clone
Clone name
hba-163j14
LE_HBa0163J14
P163J14
Clone type
BAC
Contamination
none
Estimated length
105,432
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found