Clone Read LE_HBa0163N20_T7_123586

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0163N20_T7_123586
Primer
T7
ID from Seq. Facility
LE_HBa_163_N20-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
659 trimmed for vector and quality, 883 raw
Sequence
>LE_HBa0163N20_T7_123586 (raw untrimmed)
CAAGCCTGGGTCCGGGGGTTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTTCGCCCATTTTGAATTTCCCTTTATGGCTTACTACCATAATTATCTA
AAGAAAATAACGCCTTTAATTTTCTTTAATCACTTGCTACCATAATTATCTTAAAAAAATAACAACTTTTGATTAAAAGAATAATCATTTAATATTATTT
TTATTTAAAAAAATGAAGCTTTGCTACAACATTTGAGTTTTAGATCTATTAACTTTTAATAAATTAAGATAAAAGCAAAAGAAAAAAAAATAGAGAGTAC
TTAGATGATGAATGCAGTGAAGAAGTGAAGAAGAAGACAAGTTTTTTCATTTTTTTAAATTTAATTTTAAAAAATTAAGTATATAAGTTGGAAAACAAAA
AGAAAAAAAAGAAAAAAATTAAATTTTTAATAGCTATACGCGCTCAAGGAGAGTGGAACACACTCTTTTTGCCATGTCATCATTTTGTATCTAATAGGAA
TGATTTATGAATAAATAAAGTGTTCAATAGGTACAAGCCTTAGTTGAAGTGTCTAAGTGAAATATGTGGACAACTTTACGTGGCTGTGTATGACTTAGGC
CTATTTTTATTTATCTATGTATTTTGTATCAAATATATACTAATATATCCAACGTATCTAATGGCATTCAATATCAATTTATTCTTACCTATACAAAAAA
TTGATTTGGTAATTTTGTATATCTACTCATAGTTACATATTGGTTCTTACAAGGCATTAAGTAGTCCATGGATTTCGTCGAACTCATTTTACTCGACATA
TTAACTCTAAATTCATCCTTTTTTTGTTTTGATCATTTTTTTCCATTTTTATTCAAATTTAACGGCACATGAATTTATCGCTC
>LE_HBa0163N20_T7_123586 (trimmed for quality and cloning vector)
AGCTTTTCGCCCATTTTGAATTTCCCTTTATGGCTTACTACCATAATTATCTAAAGAAAATAACGCCTTTAATTTTCTTTAATCACTTGCTACCATAATT
ATCTTAAAAAAATAACAACTTTTGATTAAAAGAATAATCATTTAATATTATTTTTATTTAAAAAAATGAAGCTTTGCTACAACATTTGAGTTTTAGATCT
ATTAACTTTTAATAAATTAAGATAAAAGCAAAAGAAAAAAAAATAGAGAGTACTTAGATGATGAATGCAGTGAAGAAGTGAAGAAGAAGACAAGTTTTTT
CATTTTTTTAAATTTAATTTTAAAAAATTAAGTATATAAGTTGGAAAACAAAAAGAAAAAAAAGAAAAAAATTAAATTTTTAATAGCTATACGCGCTCAA
GGAGAGTGGAACACACTCTTTTTGCCATGTCATCATTTTGTATCTAATAGGAATGATTTATGAATAAATAAAGTGTTCAATAGGTACAAGCCTTAGTTGA
AGTGTCTAAGTGAAATATGTGGACAACTTTACGTGGCTGTGTATGACTTAGGCCTATTTTTATTTATCTATGTATTTTGTATCAAATATATACTAATATA
TCCAACGTATCTAATGGCATTCAATATCAATTTATTCTTACCTATACAAAAAATTGATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.884576
Expected error %
0.8779
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0163N20
Clone
Clone name
hba-163n20
LE_HBa0163N20
P163N20
Clone type
BAC
Contamination
none
Estimated length
69,208
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found