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Clone Read LE_HBa0176A22_SP6_124428

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0176A22_SP6_124428
Primer
SP6
ID from Seq. Facility
LE_HBa_176_A22-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
493 trimmed for vector and quality, 913 raw
Sequence
>LE_HBa0176A22_SP6_124428 (raw untrimmed)
CCGCCCGCACTTGGGTGTTTTTTATTTTGCAAGGTACAGTTCTAAGTATTTTACTAATACAAATTGAATAATTTAAAAATCAATTTCCATTCTCTTTGAA
ATAAAATTAAACTTGAATTTCATGATTCTCTAGAAACCTATTAGTCATAGGAAATATACCCTTAAATTAAATAACGATAGTGGAAGGTGCTTCTTATCGT
AATTTTTGCTAAGCAAGAAACTCAGTTAATTTGATTACACATTTTGTAAGACCCAATTAAGCAAAAAGTGATTGTTATAAGATTTATTTAATTTTGAAAT
CTTAAATTTAAAATCTTTAATTAAAGGTGGAGTAATTCAATCCAACCTACTATACATAATCAAAGAACTTGTTATGTAACTATAAACAACACGTGTCATC
GGTTTTAGGACATAACAAATTAATTTATGTTTTCAATACATAAATTAATATGTGTCTGATTAGTTACACGTGTGTTTTACTTTTTAAAGCATAAAATGAA
TGTACGTAGATGAATTTGTGAACAACTGTTGCGTGTATGTTCCATTTGATTACATAACATATGTTTTACAAATGTATATGTGCACAAAGTTCAATTATGT
ATGAACTCTATGTTGTACGCATCTGGCCTCTATTGAGACCACATCGACTTTTGAATGCACAAATGGAAGTGACGCCATTTTCCCTGCCTACTTTTGTACC
ATGGAGTTTCCAGCTATTTCTGAATGTGAATACCGTCTAAAATTTACAAACGAACTCCCACACCACCAACACATCCCCTTTAACTCCTATACTAGATACG
GTTTCACAAACTTTTCTTCGCTTTTTTTCTATTCTCCTCCTAATCGACTCAGTTGTCCCCACCGATCTCTTTTTCACGGTCTCTCTCCCTCGCTTCCCTT
TTTTTTTTTTTTT
>LE_HBa0176A22_SP6_124428 (trimmed for quality and cloning vector)
CAGTTCTAAGTATTTTACTAATACAAATTGAATAATTTAAAAATCAATTTCCATTCTCTTTGAAATAAAATTAAACTTGAATTTCATGATTCTCTAGAAA
CCTATTAGTCATAGGAAATATACCCTTAAATTAAATAACGATAGTGGAAGGTGCTTCTTATCGTAATTTTTGCTAAGCAAGAAACTCAGTTAATTTGATT
ACACATTTTGTAAGACCCAATTAAGCAAAAAGTGATTGTTATAAGATTTATTTAATTTTGAAATCTTAAATTTAAAATCTTTAATTAAAGGTGGAGTAAT
TCAATCCAACCTACTATACATAATCAAAGAACTTGTTATGTAACTATAAACAACACGTGTCATCGGTTTTAGGACATAACAAATTAATTTATGTTTTCAA
TACATAAATTAATATGTGTCTGATTAGTTACACGTGTGTTTTACTTTTTAAAGCATAAAATGAATGTACGTAGATGAATTTGTGAACAACTGT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.896585
Expected error %
0.2788
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0176A22
Clone
Clone name
hba-176a22
LE_HBa0176A22
P176A22
Clone type
BAC
Contamination
none
Estimated length
71,280
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found