Clone Read LE_HBa0179C18_SP6_125240

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0179C18_SP6_125240
Primer
SP6
ID from Seq. Facility
LE_HBa_179_C18-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
289 trimmed for vector and quality, 902 raw
Genbank Accession
DU053001
Sequence
>LE_HBa0179C18_SP6_125240 (raw untrimmed)
CCCGGTTATTCCGGACCGTTCATGGGCGCCCCAATCCACCAAAAAATTTATTAGGGTAGTATAGTCTTTCGCGAAACTTTCCTTTTCTTGATAGGGTCTT
ACGAAAATGATCATTTTACTCCAACCTATATAATGGAGTAAACTTTGTGAAGTTGTAAAGAGGAATCGTAGTATTTTAATTTGATAGGTCATGGACCATC
TAATTCATCATGTACCGAGAGATATGGTAATTTGAATTTGACTCAAATAAAATCTCATATTGAAACTCAATTGATTAGAATACTTTCAACTCAACTTTGT
GCTAGGGGATTTTAGTTACCTTAATTCATATCGAATATCATTCCCATATTTTAAGGATTTATATAAACTAAAAAATTGACGAGTGACTGTGAAGACCCCT
AAACGGGTAATACAACTCACCATGGTGCATCTTGGGCCCTATCCATGTGACTCATATCCTGGGAGCATGTGAAGGCTGTGTCTTCCTCCCTCATCTGTGG
AGGTTTCTAAATATAAATCAGGTTTCGCTATAGGTCTCTGCACTACTCTTTAGTAAGGTTTTTTGTGGTTTGTTTTATGTTTATGTTAGTTCTAGTGTTC
TATTTATATTGCCTTTAGTTTAGTGAGGATTTTACTGTTTCTTTATATATTCATCTTTATATTCTATCATTTTTCACATTCCTATACATTATATTCTTTT
GAATTTATTTACCCCTTTCATTAGAGCTCCCTTACTTCCCTCTGCTATTTGCTGTTCTCATTAGTTACACTTTATTTATTAATACTCTATTTCTGAATTT
TACAATTGCAGTGTATACAACTTTATATATAAAAAACTCATTTTCAATTCTTGCGCATGACACAGTCTCACCCTGCTCGCCATTAGTAGCCCTCTTCCCC
AG
>LE_HBa0179C18_SP6_125240 (trimmed for quality and cloning vector)
TACGAAAATGATCATTTTACTCCAACCTATATAATGGAGTAAACTTTGTGAAGTTGTAAAGAGGAATCGTAGTATTTTAATTTGATAGGTCATGGACCAT
CTAATTCATCATGTACCGAGAGATATGGTAATTTGAATTTGACTCAAATAAAATCTCATATTGAAACTCAATTGATTAGAATACTTTCAACTCAACTTTG
TGCTAGGGGATTTTAGTTACCTTAATTCATATCGAATATCATTCCCATATTTTAAGGATTTATATAAACTAAAAAATTGACGAGTGACT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.92012
Expected error %
0.8163
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0179C18
Clone
Clone name
hba-179c18
LE_HBa0179C18
P179C18
Clone type
BAC
Contamination
none
Estimated length
85,940
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found